Conformers:
ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Influenza B virus (B/Panama/45) polymerase Hetermotrimer in complex with 3'5' cRNA promoter
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 24 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 6qwl_T_G1_G2 | AAu | AA07 | 24 | 0.74 |
| 02 | 6qwl_T_G2_C3 | NAN | NANT | 0 | 0.73 |
| 03 | 6qwl_T_C3_C4 | AAA | AA03 | 60 | 0.28 |
| 04 | 6qwl_T_C4_U5 | NAN | NANT | 0 | 0.60 |
| 05 | 6qwl_T_U5_U6 | NAN | NANT | 0 | 1.13 |
| 06 | 6qwl_T_U6_G7 | NAN | NANT | 0 | 0.79 |
| 07 | 6qwl_T_G7_U8 | NAN | NANT | 0 | 0.82 |
| 08 | 6qwl_T_U8_U9 | OPN | OP26 | 51 | 0.57 |
| 09 | 6qwl_T_U9_U10 | NAN | NANT | 0 | 2.03 |
| 10 | 6qwl_T_U10_C11 | NAN | NANT | 0 | 2.04 |
| 11 | 6qwl_T_C11_U12 | NAN | NANT | 0 | 0.91 |
| 12 | 6qwl_W_A1_G2 | NAN | NANT | 0 | 0.92 |
| 13 | 6qwl_W_G2_C3 | AAA | AA00 | 76 | 0.23 |
| 14 | 6qwl_W_C3_A4 | AAA | AA00 | 67 | 0.38 |
| 15 | 6qwl_W_A4_A5 | NAN | NANT | 0 | 2.03 |
| 16 | 6qwl_W_A5_A6 | NAN | NANT | 0 | 1.45 |
| 17 | 6qwl_W_A6_A7 | NAN | NANT | 0 | 1.07 |
| 18 | 6qwl_W_A7_G8 | NAN | NANT | 0 | 0.68 |
| 19 | 6qwl_W_G8_C9 | AAA | AA00 | 92 | 0.25 |
| 20 | 6qwl_W_C9_A10 | AAA | AA00 | 78 | 0.25 |
| 21 | 6qwl_W_A10_G11 | NAN | NANT | 0 | 1.24 |
| 22 | 6qwl_W_G11_G12 | AAA | AA00 | 73 | 0.19 |
| 23 | 6qwl_W_G12_C13 | AAA | AA08 | 85 | 0.27 |
| 24 | 6qwl_W_C13_C14 | AAA | AA08 | 71 | 0.29 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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