Results of the assignment of 19 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
| step number | Step name | CANA | NtC | confal | rmsd | |
|---|---|---|---|---|---|---|
| 01 | 5tyw_T_DC1_DG2 | A-B | AB01 | 37 | 0.21 | AB01 |
| 02 | 5tyw_T_DG2_DG3 | BBB | BB00 | 44 | 0.20 | BB00 |
| 03 | 5tyw_T_DG3_DC4 | BBB | BB00 | 57 | 0.23 | BB00 |
| 04 | 5tyw_T_DC4_DA5 | NAN | NANT | 0 | 1.13 | OP21 |
| 05 | 5tyw_T_DA5_DT6 | BBB | BB00 | 50 | 0.29 | BB00 |
| 06 | 5tyw_T_DT6_DA7 | B-A | BA10 | 68 | 0.42 | BA10 |
| 07 | 5tyw_T_DA7_DC8 | A-B | AB05 | 48 | 0.17 | AB05 |
| 08 | 5tyw_T_DC8_DG9 | BBB | BB00 | 16 | 0.45 | BB00 |
| 09 | 5tyw_P_DC1_DG2 | AAA | AA00 | 91 | 0.17 | AA00 |
| 10 | 5tyw_P_DG2_DT3 | AAA | AA00 | 81 | 0.21 | AA00 |
| 11 | 5tyw_P_DT3_DA.A4 | AAA | AA00 | 86 | 0.18 | AA00 |
| 12 | 5tyw_P_DT3_DA.B4 | AAA | AA00 | 76 | 0.19 | AA00 |
| 13 | 5tyw_P_DA.A4_DT.B5 | AAA | AA08 | 50 | 0.36 | AA08 |
| 14 | 5tyw_P_DA.B4_DT.B5 | AAA | AA08 | 50 | 0.36 | AA08 |
| 15 | 5tyw_D_DG1_DC2 | B-A | BA05 | 21 | 0.38 | BA05 |
| 16 | 5tyw_D_DC2_DC.A3 | A-B | AB01 | 28 | 0.34 | AB01 |
| 17 | 5tyw_D_DC2_DC.B3 | A-B | AB01 | 71 | 0.28 | AB01 |
| 18 | 5tyw_D_DC.A3_DG.A4 | NAN | NANT | 0 | 0.54 | AB02 |
| 19 | 5tyw_D_DC.B3_DG.B4 | BBB | BB00 | 75 | 0.24 | BB00 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Download
Results as csv or json file.Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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