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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

©Jiří Černý & Bohdan Schneider

K262A mutant of I-SmaMI

Results of the assignment of 46 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
015e63_B_DC1_DG2B-ABA05640.24BA05
025e63_B_DG2_DT3A-BAB01160.36AB01
035e63_B_DT3_DA4BBBBB00670.22BB00
045e63_B_DA4_DC5NANNANT00.44BA08
055e63_B_DC5_DA6BBBBB00160.28BB00
065e63_B_DA6_DC7B-ABA05770.26BA05
075e63_B_DC7_DC8BBBBB01400.26BB01
085e63_B_DC8_DT9A-BAB03690.33AB03
095e63_B_DT9_DG10BB2BB07430.39BB07
105e63_B_DG10_DA11BBBBB00430.27BB00
115e63_B_DA11_DT12NANNANT00.37BB05
125e63_B_DT12_DA13NANNANT00.75BB07
135e63_B_DA13_DA14NANNANT00.94BB08
145e63_C_DT15_DG16B-ABA05690.38BA05
155e63_C_DG16_DG17B-ABA05200.40BA05
165e63_C_DG17_DA18A-BAB01190.36AB01
175e63_C_DA18_DG19BBBBB00600.23BB00
185e63_C_DG19_DG20B12BB04790.24BB04
195e63_C_DG20_DA21BBBBB00860.22BB00
205e63_C_DA21_DT22BBBBB00650.24BB00
215e63_C_DT22_DA23BBBBB00600.21BB00
225e63_C_DA23_DC24miBBB10530.28BB10
235e63_C_DC24_DC25miBBB10410.35BB10
245e63_D_DG1_DG2NANNANT00.44BB03
255e63_D_DG2_DT3BBBBB00580.23BB00
265e63_D_DT3_DA4BBBBB00650.21BB00
275e63_D_DA4_DT5BBBBB00660.28BB00
285e63_D_DT5_DC6BBBBB00740.28BB00
295e63_D_DC6_DC7BBBBB01620.20BB01
305e63_D_DC7_DT8BBBBB01700.22BB01
315e63_D_DT8_DC9B-ABA05820.26BA05
325e63_D_DC9_DC10BBBBB00370.40BB00
335e63_D_DC10_DA11BB2BB07240.49BB07
345e63_D_DA11_DT12BBBBB00770.24BB00
355e63_D_DT12_DT13miBBB10480.29BB10
365e63_D_DT13_DA14NANNANT00.75BB08
375e63_D_DA14_DT15NANNANT00.64BB05
385e63_E_DC16_DA17BBBBB00790.30BB00
395e63_E_DA17_DG18B-ABA09360.37BA09
405e63_E_DG18_DG19NANNANT00.37AA10
415e63_E_DG19_DT20A-BAB05150.30AB05
425e63_E_DT20_DG21miBBB15230.39BB15
435e63_E_DG21_DT22BBBBB0190.39BB01
445e63_E_DT22_DA23BB2BB07100.40BB07
455e63_E_DA23_DC24NANNANT00.43AB02
465e63_E_DC24_DG25A-BAB01280.26AB01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Download

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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