Results of the assignment of 18 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
| step number | Step name | CANA | NtC | confal | rmsd | |
|---|---|---|---|---|---|---|
| 01 | 4o3s_T_DA2_DT3 | NAN | NANT | 0 | 2.23 | OP19 |
| 02 | 4o3s_T_DT3_DG4 | BBB | BB00 | 35 | 0.43 | BB00 |
| 03 | 4o3s_T_DG4_8OG5 | BBB | BB00 | 76 | 0.18 | BB00 |
| 04 | 4o3s_T_8OG5_DT6 | B-A | BA09 | 46 | 0.26 | BA09 |
| 05 | 4o3s_T_DT6_DG7 | NAN | NANT | 0 | 0.60 | AA00 |
| 06 | 4o3s_T_DG7_DA8 | A-B | AB01 | 46 | 0.32 | AB01 |
| 07 | 4o3s_T_DA8_DC9 | BBB | BB00 | 85 | 0.15 | BB00 |
| 08 | 4o3s_T_DC9_DG10 | B12 | BB04 | 56 | 0.24 | BB04 |
| 09 | 4o3s_T_DG10_DC11 | BBB | BB00 | 89 | 0.16 | BB00 |
| 10 | 4o3s_T_DC11_DT12 | BBB | BB00 | 91 | 0.21 | BB00 |
| 11 | 4o3s_P_DA1_DG2 | BBB | BB00 | 38 | 0.38 | BB00 |
| 12 | 4o3s_P_DG2_DC3 | BBB | BB00 | 75 | 0.23 | BB00 |
| 13 | 4o3s_P_DC3_DG4 | BBB | BB00 | 80 | 0.15 | BB00 |
| 14 | 4o3s_P_DG4_DT5 | BBB | BB00 | 76 | 0.25 | BB00 |
| 15 | 4o3s_P_DT5_DC6 | B-A | BA05 | 90 | 0.09 | BA05 |
| 16 | 4o3s_P_DC6_DA7 | B-A | BA05 | 46 | 0.29 | BA05 |
| 17 | 4o3s_P_DA7_DC.A8 | A-B | AB01 | 57 | 0.29 | AB01 |
| 18 | 4o3s_P_DA7_DC.B8 | A-B | AB02 | 32 | 0.42 | AB02 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Download
Results as csv or json file.Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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