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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

©Jiří Černý & Bohdan Schneider

Architecture and DNA recognition elements of the Fanconi anemia FANCM- FAAP24 complex

Results of the assignment of 20 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
014bxo_H_DG1_DA2NANNANT00.53AB02
024bxo_H_DA2_DT3NANNANT00.57BB13
034bxo_H_DT3_DG4BBBBB00290.74BB00
044bxo_H_DG4_DA5BB2BB07930.19BB07
054bxo_H_DA5_DT6B-ABA01620.21BA01
064bxo_H_DT6_DG7NANNANT00.54BB17
074bxo_H_DG7_DC8BB2BB08420.30BB08
084bxo_H_DC8_DT9NANNANT00.38BB01
094bxo_H_DT9_DG10BBBBB00470.35BB00
104bxo_H_DG10_DA11NANNANT00.47BB04
114bxo_I_DT1_DC2NANNANT00.74AA02
124bxo_I_DC2_DA3NANNANT00.65BB04
134bxo_I_DA3_DG4miBBB15550.28BB15
144bxo_I_DG4_DC5B-ABA05810.21BA05
154bxo_I_DC5_DA6BBBBB01330.32BB01
164bxo_I_DA6_DT7BBBBB00510.17BB00
174bxo_I_DT7_DC8BBBBB00600.29BB00
184bxo_I_DC8_DA9BB2BB07640.28BB07
194bxo_I_DA9_DT10NANNANT00.32AB02
204bxo_I_DT10_DC11NANNANT00.50BA16

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Download

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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