DNATCO v4.1: results

Mouse Lin28A in complex with let-7d microRNA pre-element

Results of the assignment of 114 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	3trz_U_G2_G3	AAA	AA00	72	0.17	AA00
002	3trz_U_G3_C4	AAA	AA00	84	0.16	AA00
003	3trz_U_C4_A5	NAN	NANT	0	0.47	AA01
004	3trz_U_A5_G6	NAN	NANT	0	0.42	IC06
005	3trz_U_G6_G7	NAN	NANT	0	0.89	OP14
006	3trz_U_G7_G8	NAN	NANT	0	0.96	OP13
007	3trz_U_G8_A9	NAN	NANT	0	1.30	BBS1
008	3trz_U_A9_U10	OPN	OP22	33	0.62	OP22
009	3trz_U_U10_U11	NAN	NANT	0	0.77	OP22
010	3trz_U_U11_U12	NAN	NANT	0	1.04	OP22
011	3trz_U_U12_U13	NAN	NANT	0	1.12	OP13
012	3trz_U_U13_G14	B-A	BA16	77	0.14	BA16
013	3trz_U_G14_C15	AAA	AA00	81	0.15	AA00
014	3trz_U_C15_C16	AAA	AA00	90	0.13	AA00
015	3trz_U_C16_C17	AAw	AA01	55	0.27	AA01
016	3trz_U_C17_G18	NAN	NANT	0	1.00	AA07
017	3trz_U_G18_G19	NAN	NANT	0	0.52	IC05
018	3trz_U_G19_A20	NAN	NANT	0	0.71	ZZ02
019	3trz_U_A20_G21	NAN	NANT	0	0.89	OP26
020	3trz_V_G2_G3	AAA	AA08	81	0.22	AA08
021	3trz_V_G3_C4	AAA	AA00	85	0.15	AA00
022	3trz_V_C4_A5	NAN	NANT	0	0.47	AA01
023	3trz_V_A5_G6	NAN	NANT	0	0.42	IC06
024	3trz_V_G6_G7	NAN	NANT	0	0.91	OP25
025	3trz_V_G7_G8	NAN	NANT	0	0.98	OP13
026	3trz_V_G8_A9	NAN	NANT	0	1.31	BBS1
027	3trz_V_A9_U10	OPN	OP22	27	0.65	OP22
028	3trz_V_U10_U11	NAN	NANT	0	0.76	OP22
029	3trz_V_U11_U12	NAN	NANT	0	1.02	OP22
030	3trz_V_U12_U13	NAN	NANT	0	1.13	OP13
031	3trz_V_U13_G14	B-A	BA16	77	0.14	BA16
032	3trz_V_G14_C15	AAA	AA00	79	0.15	AA00
033	3trz_V_C15_C16	AAA	AA00	91	0.13	AA00
034	3trz_V_C16_C17	AAw	AA01	61	0.26	AA01
035	3trz_V_C17_G18	NAN	NANT	0	1.00	AA07
036	3trz_V_G18_G19	NAN	NANT	0	0.53	IC05
037	3trz_V_G19_A20	NAN	NANT	0	0.74	ZZ02
038	3trz_V_A20_G21	NAN	NANT	0	0.90	OP26
039	3trz_W_G2_G3	AAA	AA00	71	0.17	AA00
040	3trz_W_G3_C4	AAA	AA00	85	0.16	AA00
041	3trz_W_C4_A5	NAN	NANT	0	0.47	AA01
042	3trz_W_A5_G6	NAN	NANT	0	0.41	IC06
043	3trz_W_G6_G7	NAN	NANT	0	0.88	OP14
044	3trz_W_G7_G8	NAN	NANT	0	0.95	OP13
045	3trz_W_G8_A9	NAN	NANT	0	1.32	BBS1
046	3trz_W_A9_U10	OPN	OP22	30	0.63	OP22
047	3trz_W_U10_U11	NAN	NANT	0	0.78	OP22
048	3trz_W_U11_U12	NAN	NANT	0	1.06	OP22
049	3trz_W_U12_U13	NAN	NANT	0	1.08	OP13
050	3trz_W_U13_G14	B-A	BA16	76	0.14	BA16
051	3trz_W_G14_C15	AAA	AA00	77	0.15	AA00
052	3trz_W_C15_C16	AAA	AA00	90	0.13	AA00
053	3trz_W_C16_C17	AAw	AA01	53	0.27	AA01
054	3trz_W_C17_G18	NAN	NANT	0	1.01	AA07
055	3trz_W_G18_G19	NAN	NANT	0	0.52	IC05
056	3trz_W_G19_A20	NAN	NANT	0	0.71	ZZ02
057	3trz_W_A20_G21	NAN	NANT	0	0.91	OP26
058	3trz_X_G2_G3	AAA	AA08	83	0.23	AA08
059	3trz_X_G3_C4	AAA	AA00	84	0.15	AA00
060	3trz_X_C4_A5	NAN	NANT	0	0.46	AA01
061	3trz_X_A5_G6	NAN	NANT	0	0.43	IC06
062	3trz_X_G6_G7	NAN	NANT	0	0.89	OP14
063	3trz_X_G7_G8	NAN	NANT	0	0.95	OP13
064	3trz_X_G8_A9	NAN	NANT	0	1.31	BBS1
065	3trz_X_A9_U10	OPN	OP22	27	0.63	OP22
066	3trz_X_U10_U11	NAN	NANT	0	0.76	OP22
067	3trz_X_U11_U12	NAN	NANT	0	1.03	OP22
068	3trz_X_U12_U13	NAN	NANT	0	1.12	OP13
069	3trz_X_U13_G14	B-A	BA16	81	0.13	BA16
070	3trz_X_G14_C15	AAA	AA00	79	0.15	AA00
071	3trz_X_C15_C16	AAA	AA00	91	0.13	AA00
072	3trz_X_C16_C17	AAw	AA01	53	0.27	AA01
073	3trz_X_C17_G18	NAN	NANT	0	1.02	AA07
074	3trz_X_G18_G19	NAN	NANT	0	0.51	IC05
075	3trz_X_G19_A20	NAN	NANT	0	0.71	ZZ02
076	3trz_X_A20_G21	NAN	NANT	0	0.89	OP26
077	3trz_Y_G2_G3	AAA	AA00	70	0.17	AA00
078	3trz_Y_G3_C4	AAA	AA00	84	0.16	AA00
079	3trz_Y_C4_A5	NAN	NANT	0	0.46	AA01
080	3trz_Y_A5_G6	NAN	NANT	0	0.42	IC06
081	3trz_Y_G6_G7	NAN	NANT	0	0.93	OP25
082	3trz_Y_G7_G8	NAN	NANT	0	0.96	OP13
083	3trz_Y_G8_A9	NAN	NANT	0	1.31	BBS1
084	3trz_Y_A9_U10	OPN	OP22	33	0.61	OP22
085	3trz_Y_U10_U11	NAN	NANT	0	0.77	OP22
086	3trz_Y_U11_U12	NAN	NANT	0	1.06	OP22
087	3trz_Y_U12_U13	NAN	NANT	0	1.10	OP13
088	3trz_Y_U13_G14	B-A	BA16	79	0.14	BA16
089	3trz_Y_G14_C15	AAA	AA00	79	0.15	AA00
090	3trz_Y_C15_C16	AAA	AA00	88	0.13	AA00
091	3trz_Y_C16_C17	AAw	AA01	58	0.27	AA01
092	3trz_Y_C17_G18	NAN	NANT	0	1.02	AA07
093	3trz_Y_G18_G19	NAN	NANT	0	0.53	IC05
094	3trz_Y_G19_A20	NAN	NANT	0	0.73	ZZ02
095	3trz_Y_A20_G21	NAN	NANT	0	0.88	OP26
096	3trz_Z_G2_G3	AAA	AA00	74	0.17	AA00
097	3trz_Z_G3_C4	AAA	AA00	84	0.16	AA00
098	3trz_Z_C4_A5	NAN	NANT	0	0.47	AA01
099	3trz_Z_A5_G6	NAN	NANT	0	0.43	IC06
100	3trz_Z_G6_G7	NAN	NANT	0	0.88	OP14
101	3trz_Z_G7_G8	NAN	NANT	0	0.94	OP13
102	3trz_Z_G8_A9	NAN	NANT	0	1.32	BBS1
103	3trz_Z_A9_U10	OPN	OP22	36	0.60	OP22
104	3trz_Z_U10_U11	NAN	NANT	0	0.74	OP22
105	3trz_Z_U11_U12	NAN	NANT	0	1.05	OP22
106	3trz_Z_U12_U13	NAN	NANT	0	1.15	OP13
107	3trz_Z_U13_G14	B-A	BA16	77	0.14	BA16
108	3trz_Z_G14_C15	AAA	AA00	79	0.15	AA00
109	3trz_Z_C15_C16	AAA	AA00	90	0.13	AA00
110	3trz_Z_C16_C17	AAw	AA01	54	0.27	AA01
111	3trz_Z_C17_G18	NAN	NANT	0	1.04	AA07
112	3trz_Z_G18_G19	NAN	NANT	0	0.51	IC05
113	3trz_Z_G19_A20	NAN	NANT	0	0.72	ZZ02
114	3trz_Z_A20_G21	NAN	NANT	0	0.91	OP26

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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B-A

B

IC

OPN

Z

N

Results of the assignment of 114 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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