Results of the assignment of 21 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
| step number | Step name | CANA | NtC | confal | rmsd | |
|---|---|---|---|---|---|---|
| 01 | 3oha_P_DG1_DT2 | A-B | AB05 | 51 | 0.19 | AB05 |
| 02 | 3oha_P_DT2_DC3 | BBB | BB00 | 83 | 0.24 | BB00 |
| 03 | 3oha_P_DC3_DC4 | BBB | BB00 | 77 | 0.13 | BB00 |
| 04 | 3oha_P_DC4_DT5 | BBB | BB01 | 94 | 0.14 | BB01 |
| 05 | 3oha_P_DT5_DC6 | BBB | BB01 | 84 | 0.20 | BB01 |
| 06 | 3oha_P_DC6_DC7 | B-A | BA05 | 80 | 0.26 | BA05 |
| 07 | 3oha_P_DC7_DC8 | A-B | AB03 | 74 | 0.37 | AB03 |
| 08 | 3oha_P_DC8_DC9 | B-A | BA01 | 22 | 0.30 | BA01 |
| 09 | 3oha_P_DC9_DT10 | AAA | AA00 | 54 | 0.34 | AA00 |
| 10 | 3oha_T_DT4_8OG5 | BBB | BB00 | 29 | 0.48 | BB00 |
| 11 | 3oha_T_8OG5_DG6 | BBB | BB00 | 66 | 0.25 | BB00 |
| 12 | 3oha_T_DG6_DA7 | B-A | BA09 | 93 | 0.11 | BA09 |
| 13 | 3oha_T_DA7_DG8 | AAA | AA00 | 19 | 0.49 | AA00 |
| 14 | 3oha_T_DG8_DG9 | A-B | AB01 | 14 | 0.33 | AB01 |
| 15 | 3oha_T_DG9_DG10 | B-A | BA05 | 50 | 0.21 | BA05 |
| 16 | 3oha_T_DG10_DG11 | A-B | AB01 | 57 | 0.30 | AB01 |
| 17 | 3oha_T_DG11_DA12 | B12 | BB04 | 67 | 0.28 | BB04 |
| 18 | 3oha_T_DA12_DG13 | BBB | BB00 | 82 | 0.28 | BB00 |
| 19 | 3oha_T_DG13_DG14 | BB2 | BB07 | 82 | 0.16 | BB07 |
| 20 | 3oha_T_DG14_DA15 | BBB | BB00 | 79 | 0.23 | BB00 |
| 21 | 3oha_T_DA15_DC16 | BBB | BB00 | 39 | 0.28 | BB00 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Download
Results as csv or json file.Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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