Results of the assignment of 28 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
| step number | Step name | CANA | NtC | confal | rmsd | |
|---|---|---|---|---|---|---|
| 01 | 3lzi_T_DT1_DC2 | NAN | NANT | 0 | 1.38 | AA11 |
| 02 | 3lzi_T_DC2_DA3 | NAN | NANT | 0 | 1.09 | ZZS2 |
| 03 | 3lzi_T_DA3_8OG4 | NAN | NANT | 0 | 1.25 | OP17 |
| 04 | 3lzi_T_8OG4_DG5 | SYN | AAS1 | 61 | 0.45 | AAS1 |
| 05 | 3lzi_T_DG5_DT6 | A-B | AB05 | 57 | 0.29 | AB05 |
| 06 | 3lzi_T_DT6_DA7 | BBB | BB00 | 68 | 0.29 | BB00 |
| 07 | 3lzi_T_DA7_DA8 | BBB | BB00 | 78 | 0.27 | BB00 |
| 08 | 3lzi_T_DA8_DG9 | B12 | BB04 | 61 | 0.27 | BB04 |
| 09 | 3lzi_T_DG9_DC10 | BBB | BB00 | 77 | 0.25 | BB00 |
| 10 | 3lzi_T_DC10_DA11 | BBB | BB00 | 84 | 0.31 | BB00 |
| 11 | 3lzi_T_DA11_DG12 | B-A | BA05 | 68 | 0.24 | BA05 |
| 12 | 3lzi_T_DG12_DT13 | BBB | BB00 | 10 | 0.42 | BB00 |
| 13 | 3lzi_T_DT13_DC14 | BBB | BB00 | 91 | 0.17 | BB00 |
| 14 | 3lzi_T_DC14_DC15 | BBB | BB01 | 74 | 0.20 | BB01 |
| 15 | 3lzi_T_DC15_DG16 | BBB | BB00 | 72 | 0.26 | BB00 |
| 16 | 3lzi_T_DG16_DC17 | BBB | BB00 | 48 | 0.31 | BB00 |
| 17 | 3lzi_T_DC17_DG18 | NAN | NANT | 0 | 1.00 | OP17 |
| 18 | 3lzi_P_DG103_DC104 | BB2 | BB07 | 25 | 0.45 | BB07 |
| 19 | 3lzi_P_DC104_DG105 | NAN | NANT | 0 | 0.62 | BA17 |
| 20 | 3lzi_P_DG105_DG106 | A-B | AB02 | 35 | 0.40 | AB02 |
| 21 | 3lzi_P_DG106_DA107 | BBB | BB00 | 75 | 0.25 | BB00 |
| 22 | 3lzi_P_DA107_DC108 | NAN | NANT | 0 | 0.48 | BA09 |
| 23 | 3lzi_P_DC108_DT109 | A-B | AB05 | 41 | 0.25 | AB05 |
| 24 | 3lzi_P_DT109_DG110 | BBB | BB01 | 60 | 0.16 | BB01 |
| 25 | 3lzi_P_DG110_DC111 | B-A | BA05 | 79 | 0.23 | BA05 |
| 26 | 3lzi_P_DC111_DT112 | BBB | BB01 | 79 | 0.17 | BB01 |
| 27 | 3lzi_P_DT112_DT113 | BBB | BB01 | 45 | 0.34 | BB01 |
| 28 | 3lzi_P_DT113_DA114 | BBB | BB00 | 38 | 0.27 | BB00 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Download
Results as csv or json file.Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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| Color by conformation group (pyramids) | |
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