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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

©Jiří Černý & Bohdan Schneider

Structure of the catalytic subunit of telomerase bound to its RNA template and telomeric DNA

Results of the assignment of 23 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
013kyl_E_C1_U2AAAAA00720.16AA00
023kyl_E_U2_G3AAAAA00640.28AA00
033kyl_E_G3_A4AAAAA00840.12AA00
043kyl_E_A4_C5AAAAA00830.21AA00
053kyl_E_C5_C6AAAAA00880.16AA00
063kyl_E_C6_U7AAAAA00360.27AA00
073kyl_E_U7_G8AAwAA01740.15AA01
083kyl_E_G8_A9AAAAA00710.19AA00
093kyl_E_A9_C10NANNANT00.39AB03
103kyl_E_C10_DT11NANNANT00.62OP13
113kyl_E_DT11_DT12NANNANT00.90OP22
123kyl_E_DT12_DC13NANNANT00.43OP20
133kyl_E_DC13_DG14BBBBB00250.52BB00
143kyl_E_DG14_DG15B12BB04670.25BB04
153kyl_E_DG15_DT16BBBBB00690.22BB00
163kyl_E_DT16_DC17B-ABA10790.33BA10
173kyl_E_DC17_DA18NANNANT00.51AA00
183kyl_E_DA18_DG19NANNANT00.53AA01
193kyl_E_DG19_DG20AAwAA01380.29AA01
203kyl_E_DG20_DT21AAAAA00880.14AA00
213kyl_E_DT21_DC22AAAAA00970.11AA00
223kyl_E_DC22_DA23NANNANT00.68AA10
233kyl_E_DA23_DG24NANNANT00.81AA05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Download

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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