DNATCO v3.2: results

Click the Summary/Torsions/Similar/... tabs for more details.
Center view on step or molecule.
Show reference and contacts	model altloc

Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.

step number	Step name	CANA	NtC	confal	rmsd
01	3ecp_B_DG1_DA2	BBw	BB17	13	0.46	BB17
02	3ecp_B_DA2_DC3	BBB	BB00	75	0.32	BB00
03	3ecp_B_DC3_DT4	miB	BB10	64	0.48	BB10
04	3ecp_B_DT4_DT5	BBB	BB00	26	0.35	BB00
05	3ecp_B_DT5_DG6	BBB	BB00	41	0.39	BB00
06	3ecp_B_DG6_DT7	BBB	BB00	65	0.35	BB00
07	3ecp_B_DT7_DG8	BBB	BB00	86	0.20	BB00
08	3ecp_B_DG8_DT9	BBB	BB01	45	0.23	BB01
09	3ecp_B_DT9_DA10	A-B	AB03	78	0.32	AB03
10	3ecp_B_DA10_DT11	BBB	BB01	48	0.20	BB01
11	3ecp_B_DT11_DA12	B-A	BA05	47	0.16	BA05
12	3ecp_B_DA12_DA13	A-B	AB03	89	0.23	AB03
13	3ecp_B_DA13_DG14	BB2	BB07	67	0.27	BB07
14	3ecp_B_DG14_DA15	BBB	BB00	76	0.23	BB00
15	3ecp_B_DA15_DG16	BBB	BB01	45	0.15	BB01
16	3ecp_B_DG16_DT17	BBB	BB01	54	0.24	BB01
17	3ecp_B_DT17_DC18	BBB	BB00	33	0.27	BB00
18	3ecp_B_DC18_DA19	NAN	NANT	0	0.65	BB00
19	3ecp_B_DA19_DG20	NAN	NANT	0	0.41	AB02
20	3ecp_C_DC1_DT2	NAN	NANT	0	2.17	OP28
21	3ecp_C_DT2_DG3	NAN	NANT	0	1.39	OP11
22	3ecp_C_DG3_DA4	NAN	NANT	0	0.56	BB16
23	3ecp_C_DA4_DC5	B-A	BA10	54	0.31	BA10
24	3ecp_C_DC5_DT6	A-B	AB05	30	0.24	AB05
25	3ecp_C_DT6_DC7	BBB	BB00	40	0.19	BB00
26	3ecp_C_DC7_DT8	BBB	BB01	32	0.26	BB01
27	3ecp_C_DT8_DT9	BBB	BB01	21	0.25	BB01
28	3ecp_C_DT9_DA10	B-A	BA10	44	0.29	BA10
29	3ecp_C_DA10_DT11	NAN	NANT	0	0.53	BB16
30	3ecp_C_DT11_DA12	BBB	BB00	51	0.35	BB00
31	3ecp_C_DA12_DC13	NAN	NANT	0	0.37	BB02
32	3ecp_C_DC13_DA14	NAN	NANT	0	0.36	BB00
33	3ecp_C_DA14_DC15	BBB	BB00	45	0.29	BB00
34	3ecp_C_DC15_DA16	B12	BB04	74	0.19	BB04
35	3ecp_C_DA16_DA17	BBB	BB00	54	0.16	BB00
36	3ecp_C_DA17_DG18	B-A	BA16	19	0.26	BA16
37	3ecp_C_DG18_DT19	NAN	NANT	0	0.56	BB03
38	3ecp_C_DT19_DC20	NAN	NANT	0	0.44	BA05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

δ1

ε1

ζ1

α2

β2

γ2

δ2

χ1

χ2

step_torsions

ntC_average

Δ torsions

torsion scores

comments step confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

Color by conformation group (pyramids)

Color by conformation group (pyramids)

group
visible

Color by NtC (balls)

Color by NtC (balls)

A

A-B

B-A

IC

OPN

Z

N