DNATCO v4.1: results

Solution structure of the ID3 stem loop of domain 1 of the ai5gamma group II intron

Results of the assignment of 220 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2m12-m10_A_G1_G2	NAN	NANT	0	0.40	BA05
002	2m12-m1_A_G1_G2	NAN	NANT	0	0.36	BA08
003	2m12-m2_A_G1_G2	AAA	AA00	87	0.21	AA00
004	2m12-m3_A_G1_G2	AAA	AA00	88	0.20	AA00
005	2m12-m4_A_G1_G2	AAA	AA00	90	0.20	AA00
006	2m12-m5_A_G1_G2	AAA	AA00	87	0.21	AA00
007	2m12-m6_A_G1_G2	NAN	NANT	0	0.35	BA08
008	2m12-m7_A_G1_G2	NAN	NANT	0	0.36	BA08
009	2m12-m8_A_G1_G2	AAA	AA00	88	0.20	AA00
010	2m12-m9_A_G1_G2	AAA	AA00	89	0.20	AA00
011	2m12-m10_A_G2_G3	AAA	AA00	98	0.20	AA00
012	2m12-m1_A_G2_G3	AAA	AA00	98	0.21	AA00
013	2m12-m2_A_G2_G3	AAA	AA00	97	0.21	AA00
014	2m12-m3_A_G2_G3	AAA	AA00	98	0.21	AA00
015	2m12-m4_A_G2_G3	AAA	AA00	97	0.21	AA00
016	2m12-m5_A_G2_G3	AAA	AA00	97	0.21	AA00
017	2m12-m6_A_G2_G3	AAA	AA00	98	0.20	AA00
018	2m12-m7_A_G2_G3	AAA	AA00	98	0.20	AA00
019	2m12-m8_A_G2_G3	AAA	AA00	98	0.20	AA00
020	2m12-m9_A_G2_G3	AAA	AA00	97	0.21	AA00
021	2m12-m10_A_G3_U4	AAA	AA00	97	0.24	AA00
022	2m12-m1_A_G3_U4	AAA	AA00	98	0.24	AA00
023	2m12-m2_A_G3_U4	AAA	AA00	97	0.24	AA00
024	2m12-m3_A_G3_U4	AAA	AA00	97	0.24	AA00
025	2m12-m4_A_G3_U4	AAA	AA00	97	0.24	AA00
026	2m12-m5_A_G3_U4	AAA	AA00	94	0.26	AA00
027	2m12-m6_A_G3_U4	AAA	AA00	97	0.24	AA00
028	2m12-m7_A_G3_U4	AAA	AA00	97	0.23	AA00
029	2m12-m8_A_G3_U4	AAA	AA00	97	0.24	AA00
030	2m12-m9_A_G3_U4	AAA	AA00	97	0.24	AA00
031	2m12-m10_A_U4_G5	AAA	AA00	94	0.28	AA00
032	2m12-m1_A_U4_G5	AAA	AA00	98	0.27	AA00
033	2m12-m2_A_U4_G5	AAA	AA00	97	0.25	AA00
034	2m12-m3_A_U4_G5	AAA	AA00	97	0.27	AA00
035	2m12-m4_A_U4_G5	AAA	AA00	97	0.26	AA00
036	2m12-m5_A_U4_G5	AAA	AA00	97	0.26	AA00
037	2m12-m6_A_U4_G5	AAA	AA00	95	0.28	AA00
038	2m12-m7_A_U4_G5	AAA	AA00	98	0.26	AA00
039	2m12-m8_A_U4_G5	AAA	AA00	95	0.27	AA00
040	2m12-m9_A_U4_G5	AAA	AA00	97	0.26	AA00
041	2m12-m10_A_G5_U6	AAw	AA01	65	0.33	AA01
042	2m12-m1_A_G5_U6	AAw	AA01	57	0.32	AA01
043	2m12-m2_A_G5_U6	AAA	AA00	88	0.32	AA00
044	2m12-m3_A_G5_U6	AAw	AA01	60	0.32	AA01
045	2m12-m4_A_G5_U6	AAw	AA01	58	0.32	AA01
046	2m12-m5_A_G5_U6	AAA	AA00	80	0.33	AA00
047	2m12-m6_A_G5_U6	AAw	AA01	66	0.35	AA01
048	2m12-m7_A_G5_U6	AAA	AA00	84	0.32	AA00
049	2m12-m8_A_G5_U6	AAw	AA01	54	0.35	AA01
050	2m12-m9_A_G5_U6	AAw	AA01	34	0.40	AA01
051	2m12-m10_A_U6_A7	NAN	NANT	0	0.69	AA10
052	2m12-m1_A_U6_A7	NAN	NANT	0	0.88	AA06
053	2m12-m2_A_U6_A7	NAN	NANT	0	0.67	AA10
054	2m12-m3_A_U6_A7	NAN	NANT	0	0.75	AA10
055	2m12-m4_A_U6_A7	NAN	NANT	0	0.73	AA10
056	2m12-m5_A_U6_A7	NAN	NANT	0	0.95	AA11
057	2m12-m6_A_U6_A7	NAN	NANT	0	0.59	AA10
058	2m12-m7_A_U6_A7	NAN	NANT	0	0.70	AA06
059	2m12-m8_A_U6_A7	NAN	NANT	0	0.59	AA10
060	2m12-m9_A_U6_A7	NAN	NANT	0	0.96	AA11
061	2m12-m10_A_A7_U8	A-B	AB05	10	0.55	AB05
062	2m12-m1_A_A7_U8	NAN	NANT	0	0.71	AA10
063	2m12-m2_A_A7_U8	A-B	AB05	15	0.51	AB05
064	2m12-m3_A_A7_U8	NAN	NANT	0	0.80	BB13
065	2m12-m4_A_A7_U8	A-B	AB05	29	0.46	AB05
066	2m12-m5_A_A7_U8	BBB	BB00	10	0.46	BB00
067	2m12-m6_A_A7_U8	NAN	NANT	0	0.49	AA11
068	2m12-m7_A_A7_U8	NAN	NANT	0	0.73	AA06
069	2m12-m8_A_A7_U8	A-B	AB05	13	0.61	AB05
070	2m12-m9_A_A7_U8	NAN	NANT	0	0.49	AA11
071	2m12-m10_A_U8_U9	BBB	BB00	39	0.34	BB00
072	2m12-m1_A_U8_U9	NAN	NANT	0	0.59	BB02
073	2m12-m2_A_U8_U9	NAN	NANT	0	0.68	BB02
074	2m12-m3_A_U8_U9	NAN	NANT	0	0.46	BB11
075	2m12-m4_A_U8_U9	NAN	NANT	0	0.60	BB02
076	2m12-m5_A_U8_U9	NAN	NANT	0	0.55	BB13
077	2m12-m6_A_U8_U9	BBB	BB00	21	0.43	BB00
078	2m12-m7_A_U8_U9	NAN	NANT	0	0.44	BB03
079	2m12-m8_A_U8_U9	NAN	NANT	0	0.79	BB10
080	2m12-m9_A_U8_U9	BBB	BB00	31	0.34	BB00
081	2m12-m10_A_U9_G10	NAN	NANT	0	1.04	OP12
082	2m12-m1_A_U9_G10	NAN	NANT	0	1.10	OP12
083	2m12-m2_A_U9_G10	NAN	NANT	0	1.10	OP12
084	2m12-m3_A_U9_G10	NAN	NANT	0	1.97	BB12
085	2m12-m4_A_U9_G10	NAN	NANT	0	1.10	OP12
086	2m12-m5_A_U9_G10	NAN	NANT	0	1.46	OP1S
087	2m12-m6_A_U9_G10	NAN	NANT	0	1.65	BB12
088	2m12-m7_A_U9_G10	NAN	NANT	0	1.88	AA10
089	2m12-m8_A_U9_G10	NAN	NANT	0	1.36	BB11
090	2m12-m9_A_U9_G10	NAN	NANT	0	1.41	OP1S
091	2m12-m10_A_G10_G11	NAN	NANT	0	2.44	OP28
092	2m12-m1_A_G10_G11	NAN	NANT	0	1.73	ZZ1S
093	2m12-m2_A_G10_G11	NAN	NANT	0	1.43	ZZ1S
094	2m12-m3_A_G10_G11	NAN	NANT	0	1.75	ZZ1S
095	2m12-m4_A_G10_G11	NAN	NANT	0	1.77	ZZ2S
096	2m12-m5_A_G10_G11	NAN	NANT	0	1.08	ZZ1S
097	2m12-m6_A_G10_G11	NAN	NANT	0	1.04	OP09
098	2m12-m7_A_G10_G11	NAN	NANT	0	1.22	ZZ2S
099	2m12-m8_A_G10_G11	NAN	NANT	0	0.94	OP18
100	2m12-m9_A_G10_G11	NAN	NANT	0	0.81	OP18
101	2m12-m10_A_G11_A12	NAN	NANT	0	1.55	OP10
102	2m12-m1_A_G11_A12	NAN	NANT	0	0.97	BB20
103	2m12-m2_A_G11_A12	NAN	NANT	0	0.78	OP15
104	2m12-m3_A_G11_A12	NAN	NANT	0	1.25	BB2S
105	2m12-m4_A_G11_A12	NAN	NANT	0	1.13	OP15
106	2m12-m5_A_G11_A12	NAN	NANT	0	1.21	ZZS1
107	2m12-m6_A_G11_A12	NAN	NANT	0	1.18	OP15
108	2m12-m7_A_G11_A12	NAN	NANT	0	1.22	ZZS1
109	2m12-m8_A_G11_A12	NAN	NANT	0	1.74	BA16
110	2m12-m9_A_G11_A12	NAN	NANT	0	2.29	OPS1
111	2m12-m10_A_A12_A13	NAN	NANT	0	0.85	OP17
112	2m12-m1_A_A12_A13	NAN	NANT	0	0.88	BA16
113	2m12-m2_A_A12_A13	NAN	NANT	0	1.04	OP17
114	2m12-m3_A_A12_A13	NAN	NANT	0	0.89	AB2S
115	2m12-m4_A_A12_A13	NAN	NANT	0	1.22	IC04
116	2m12-m5_A_A12_A13	NAN	NANT	0	0.93	BB08
117	2m12-m6_A_A12_A13	NAN	NANT	0	1.30	OP08
118	2m12-m7_A_A12_A13	NAN	NANT	0	1.21	BA13
119	2m12-m8_A_A12_A13	NAN	NANT	0	0.83	AA04
120	2m12-m9_A_A12_A13	NAN	NANT	0	0.88	IC04
121	2m12-m10_A_A13_A14	NAN	NANT	0	1.63	BB1S
122	2m12-m1_A_A13_A14	NAN	NANT	0	0.82	AA11
123	2m12-m2_A_A13_A14	NAN	NANT	0	0.92	AA10
124	2m12-m3_A_A13_A14	NAN	NANT	0	0.84	AA06
125	2m12-m4_A_A13_A14	NAN	NANT	0	0.65	BB20
126	2m12-m5_A_A13_A14	NAN	NANT	0	0.71	BB20
127	2m12-m6_A_A13_A14	NAN	NANT	0	1.36	BB03
128	2m12-m7_A_A13_A14	NAN	NANT	0	0.91	BB13
129	2m12-m8_A_A13_A14	NAN	NANT	0	0.86	AB05
130	2m12-m9_A_A13_A14	NAN	NANT	0	1.25	BB12
131	2m12-m10_A_A14_U15	NAN	NANT	0	1.18	BBS1
132	2m12-m1_A_A14_U15	NAN	NANT	0	1.43	BB03
133	2m12-m2_A_A14_U15	NAN	NANT	0	1.80	OP23
134	2m12-m3_A_A14_U15	NAN	NANT	0	1.27	BB15
135	2m12-m4_A_A14_U15	NAN	NANT	0	1.31	AB02
136	2m12-m5_A_A14_U15	NAN	NANT	0	1.63	BB02
137	2m12-m6_A_A14_U15	NAN	NANT	0	1.82	OP23
138	2m12-m7_A_A14_U15	NAN	NANT	0	1.33	BB10
139	2m12-m8_A_A14_U15	NAN	NANT	0	1.26	BB15
140	2m12-m9_A_A14_U15	NAN	NANT	0	1.12	BB15
141	2m12-m10_A_U15_G16	NAN	NANT	0	0.78	BB03
142	2m12-m1_A_U15_G16	NAN	NANT	0	0.61	OP12
143	2m12-m2_A_U15_G16	NAN	NANT	0	1.10	BB00
144	2m12-m3_A_U15_G16	B-A	BA09	33	0.32	BA09
145	2m12-m4_A_U15_G16	NAN	NANT	0	1.24	IC03
146	2m12-m5_A_U15_G16	NAN	NANT	0	0.77	BA01
147	2m12-m6_A_U15_G16	NAN	NANT	0	1.05	BA16
148	2m12-m7_A_U15_G16	NAN	NANT	0	0.71	BB15
149	2m12-m8_A_U15_G16	B-A	BA09	12	0.32	BA09
150	2m12-m9_A_U15_G16	NAN	NANT	0	0.79	BB15
151	2m12-m10_A_G16_A17	NAN	NANT	0	1.06	OP24
152	2m12-m1_A_G16_A17	NAN	NANT	0	0.85	BB12
153	2m12-m2_A_G16_A17	NAN	NANT	0	0.90	ZZ2S
154	2m12-m3_A_G16_A17	NAN	NANT	0	1.02	AA04
155	2m12-m4_A_G16_A17	NAN	NANT	0	1.11	BB12
156	2m12-m5_A_G16_A17	NAN	NANT	0	1.23	AA10
157	2m12-m6_A_G16_A17	NAN	NANT	0	0.94	BB13
158	2m12-m7_A_G16_A17	NAN	NANT	0	1.08	ZZ02
159	2m12-m8_A_G16_A17	NAN	NANT	0	1.26	AA10
160	2m12-m9_A_G16_A17	NAN	NANT	0	0.83	AB04
161	2m12-m10_A_A17_G18	AAA	AA00	31	0.44	AA00
162	2m12-m1_A_A17_G18	NAN	NANT	0	0.98	OP12
163	2m12-m2_A_A17_G18	NAN	NANT	0	0.95	OP12
164	2m12-m3_A_A17_G18	AAA	AA00	52	0.37	AA00
165	2m12-m4_A_A17_G18	NAN	NANT	0	0.80	AA00
166	2m12-m5_A_A17_G18	NAN	NANT	0	1.02	OP12
167	2m12-m6_A_A17_G18	NAN	NANT	0	0.99	OP12
168	2m12-m7_A_A17_G18	NAN	NANT	0	0.51	AA00
169	2m12-m8_A_A17_G18	NAN	NANT	0	0.99	OP12
170	2m12-m9_A_A17_G18	NAN	NANT	0	1.52	OP22
171	2m12-m10_A_G18_C19	AAA	AA00	88	0.27	AA00
172	2m12-m1_A_G18_C19	AAA	AA00	88	0.27	AA00
173	2m12-m2_A_G18_C19	AAA	AA00	82	0.30	AA00
174	2m12-m3_A_G18_C19	AAA	AA00	85	0.29	AA00
175	2m12-m4_A_G18_C19	AAA	AA00	89	0.27	AA00
176	2m12-m5_A_G18_C19	AAA	AA00	86	0.28	AA00
177	2m12-m6_A_G18_C19	AAA	AA00	82	0.29	AA00
178	2m12-m7_A_G18_C19	AAA	AA00	81	0.29	AA00
179	2m12-m8_A_G18_C19	AAA	AA00	75	0.30	AA00
180	2m12-m9_A_G18_C19	NAN	NANT	0	0.48	AA00
181	2m12-m10_A_C19_A20	AAA	AA00	96	0.23	AA00
182	2m12-m1_A_C19_A20	AAA	AA00	97	0.23	AA00
183	2m12-m2_A_C19_A20	AAA	AA00	97	0.22	AA00
184	2m12-m3_A_C19_A20	AAA	AA00	97	0.22	AA00
185	2m12-m4_A_C19_A20	AAA	AA00	97	0.22	AA00
186	2m12-m5_A_C19_A20	AAA	AA00	96	0.22	AA00
187	2m12-m6_A_C19_A20	AAA	AA00	97	0.22	AA00
188	2m12-m7_A_C19_A20	AAA	AA00	96	0.22	AA00
189	2m12-m8_A_C19_A20	AAA	AA00	97	0.21	AA00
190	2m12-m9_A_C19_A20	AAA	AA00	98	0.21	AA00
191	2m12-m10_A_A20_C21	AAA	AA00	96	0.25	AA00
192	2m12-m1_A_A20_C21	AAA	AA00	98	0.25	AA00
193	2m12-m2_A_A20_C21	AAA	AA00	97	0.24	AA00
194	2m12-m3_A_A20_C21	AAA	AA00	97	0.25	AA00
195	2m12-m4_A_A20_C21	AAA	AA00	97	0.24	AA00
196	2m12-m5_A_A20_C21	AAA	AA00	95	0.26	AA00
197	2m12-m6_A_A20_C21	AAA	AA00	96	0.25	AA00
198	2m12-m7_A_A20_C21	AAA	AA00	97	0.25	AA00
199	2m12-m8_A_A20_C21	AAA	AA00	96	0.24	AA00
200	2m12-m9_A_A20_C21	AAA	AA00	97	0.24	AA00
201	2m12-m10_A_C21_C22	AAA	AA00	97	0.27	AA00
202	2m12-m1_A_C21_C22	AAA	AA00	96	0.30	AA00
203	2m12-m2_A_C21_C22	AAA	AA00	98	0.25	AA00
204	2m12-m3_A_C21_C22	AAA	AA00	97	0.26	AA00
205	2m12-m4_A_C21_C22	AAA	AA00	97	0.26	AA00
206	2m12-m5_A_C21_C22	AAA	AA00	97	0.26	AA00
207	2m12-m6_A_C21_C22	AAA	AA00	97	0.27	AA00
208	2m12-m7_A_C21_C22	AAA	AA00	97	0.27	AA00
209	2m12-m8_A_C21_C22	AAA	AA00	97	0.25	AA00
210	2m12-m9_A_C21_C22	AAA	AA00	98	0.25	AA00
211	2m12-m10_A_C22_C23	AAA	AA00	93	0.31	AA00
212	2m12-m1_A_C22_C23	AAw	AA01	75	0.33	AA01
213	2m12-m2_A_C22_C23	AAA	AA00	93	0.30	AA00
214	2m12-m3_A_C22_C23	AAA	AA00	92	0.31	AA00
215	2m12-m4_A_C22_C23	AAA	AA00	92	0.30	AA00
216	2m12-m5_A_C22_C23	AAA	AA00	92	0.30	AA00
217	2m12-m6_A_C22_C23	AAA	AA00	92	0.32	AA00
218	2m12-m7_A_C22_C23	AAA	AA00	92	0.31	AA00
219	2m12-m8_A_C22_C23	AAA	AA00	92	0.30	AA00
220	2m12-m9_A_C22_C23	AAA	AA00	93	0.30	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 220 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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