DNATCO v4.1: results

Pseudo-triloop from the sub-genomic promoter of Brome Mosaic Virus

Results of the assignment of 150 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2lp9-m10_A_G1_A2	AAA	AA00	90	0.12	AA00
002	2lp9-m1_A_G1_A2	AAA	AA00	90	0.10	AA00
003	2lp9-m2_A_G1_A2	AAA	AA00	89	0.12	AA00
004	2lp9-m3_A_G1_A2	AAA	AA00	90	0.10	AA00
005	2lp9-m4_A_G1_A2	AAA	AA00	90	0.11	AA00
006	2lp9-m5_A_G1_A2	AAA	AA00	90	0.12	AA00
007	2lp9-m6_A_G1_A2	AAA	AA00	93	0.10	AA00
008	2lp9-m7_A_G1_A2	AAA	AA00	90	0.10	AA00
009	2lp9-m8_A_G1_A2	AAA	AA00	89	0.12	AA00
010	2lp9-m9_A_G1_A2	AAA	AA00	91	0.10	AA00
011	2lp9-m10_A_A2_G3	AAA	AA00	85	0.13	AA00
012	2lp9-m1_A_A2_G3	AAA	AA00	85	0.12	AA00
013	2lp9-m2_A_A2_G3	AAA	AA00	83	0.15	AA00
014	2lp9-m3_A_A2_G3	AAA	AA00	86	0.12	AA00
015	2lp9-m4_A_A2_G3	AAA	AA00	85	0.12	AA00
016	2lp9-m5_A_A2_G3	AAA	AA00	83	0.13	AA00
017	2lp9-m6_A_A2_G3	AAA	AA00	88	0.12	AA00
018	2lp9-m7_A_A2_G3	AAA	AA00	88	0.09	AA00
019	2lp9-m8_A_A2_G3	AAA	AA00	83	0.13	AA00
020	2lp9-m9_A_A2_G3	AAA	AA00	86	0.11	AA00
021	2lp9-m10_A_G3_G4	AAA	AA00	89	0.10	AA00
022	2lp9-m1_A_G3_G4	AAA	AA00	89	0.10	AA00
023	2lp9-m2_A_G3_G4	AAA	AA00	87	0.11	AA00
024	2lp9-m3_A_G3_G4	AAA	AA00	89	0.10	AA00
025	2lp9-m4_A_G3_G4	AAA	AA00	85	0.10	AA00
026	2lp9-m5_A_G3_G4	AAA	AA00	86	0.10	AA00
027	2lp9-m6_A_G3_G4	AAA	AA00	85	0.16	AA00
028	2lp9-m7_A_G3_G4	AAA	AA00	86	0.12	AA00
029	2lp9-m8_A_G3_G4	AAA	AA00	84	0.10	AA00
030	2lp9-m9_A_G3_G4	AAA	AA00	87	0.10	AA00
031	2lp9-m10_A_G4_A5	AAA	AA00	85	0.20	AA00
032	2lp9-m1_A_G4_A5	AAA	AA00	86	0.19	AA00
033	2lp9-m2_A_G4_A5	AAA	AA00	82	0.21	AA00
034	2lp9-m3_A_G4_A5	AAA	AA00	87	0.16	AA00
035	2lp9-m4_A_G4_A5	AAA	AA00	84	0.20	AA00
036	2lp9-m5_A_G4_A5	AAA	AA00	85	0.19	AA00
037	2lp9-m6_A_G4_A5	AAA	AA00	91	0.15	AA00
038	2lp9-m7_A_G4_A5	AAA	AA00	85	0.21	AA00
039	2lp9-m8_A_G4_A5	AAA	AA00	82	0.21	AA00
040	2lp9-m9_A_G4_A5	AAA	AA00	87	0.18	AA00
041	2lp9-m10_A_A5_C6	AAA	AA00	80	0.34	AA00
042	2lp9-m1_A_A5_C6	AAA	AA00	76	0.33	AA00
043	2lp9-m2_A_A5_C6	AAA	AA00	81	0.30	AA00
044	2lp9-m3_A_A5_C6	AAA	AA00	85	0.27	AA00
045	2lp9-m4_A_A5_C6	AAA	AA00	72	0.35	AA00
046	2lp9-m5_A_A5_C6	AAA	AA00	79	0.32	AA00
047	2lp9-m6_A_A5_C6	AAA	AA08	88	0.24	AA08
048	2lp9-m7_A_A5_C6	AAA	AA00	77	0.35	AA00
049	2lp9-m8_A_A5_C6	AAA	AA00	77	0.32	AA00
050	2lp9-m9_A_A5_C6	AAA	AA00	82	0.30	AA00
051	2lp9-m10_A_C6_A7	NAN	NANT	0	0.81	AB05
052	2lp9-m1_A_C6_A7	NAN	NANT	0	0.87	AB05
053	2lp9-m2_A_C6_A7	NAN	NANT	0	0.85	AB05
054	2lp9-m3_A_C6_A7	NAN	NANT	0	0.79	AB05
055	2lp9-m4_A_C6_A7	NAN	NANT	0	0.81	AB05
056	2lp9-m5_A_C6_A7	NAN	NANT	0	0.81	AB05
057	2lp9-m6_A_C6_A7	A-B	AB05	11	0.79	AB05
058	2lp9-m7_A_C6_A7	A-B	AB05	11	0.80	AB05
059	2lp9-m8_A_C6_A7	NAN	NANT	0	0.80	AB05
060	2lp9-m9_A_C6_A7	NAN	NANT	0	0.82	AB05
061	2lp9-m10_A_A7_U8	OPN	OP22	21	0.71	OP22
062	2lp9-m1_A_A7_U8	NAN	NANT	0	0.82	OP22
063	2lp9-m2_A_A7_U8	NAN	NANT	0	0.80	OP22
064	2lp9-m3_A_A7_U8	NAN	NANT	0	0.73	OP22
065	2lp9-m4_A_A7_U8	NAN	NANT	0	0.71	OP22
066	2lp9-m5_A_A7_U8	NAN	NANT	0	0.72	OP22
067	2lp9-m6_A_A7_U8	NAN	NANT	0	0.71	OP22
068	2lp9-m7_A_A7_U8	OPN	OP22	63	0.63	OP22
069	2lp9-m8_A_A7_U8	OPN	OP22	28	0.66	OP22
070	2lp9-m9_A_A7_U8	NAN	NANT	0	0.74	OP22
071	2lp9-m10_A_U8_A9	NAN	NANT	0	1.34	BA17
072	2lp9-m1_A_U8_A9	NAN	NANT	0	0.90	ZZ02
073	2lp9-m2_A_U8_A9	NAN	NANT	0	0.91	ZZ02
074	2lp9-m3_A_U8_A9	NAN	NANT	0	1.57	BB08
075	2lp9-m4_A_U8_A9	NAN	NANT	0	1.56	BB08
076	2lp9-m5_A_U8_A9	NAN	NANT	0	1.59	BB08
077	2lp9-m6_A_U8_A9	NAN	NANT	0	0.91	ZZ02
078	2lp9-m7_A_U8_A9	NAN	NANT	0	1.42	BB08
079	2lp9-m8_A_U8_A9	NAN	NANT	0	1.49	BB08
080	2lp9-m9_A_U8_A9	NAN	NANT	0	0.89	ZZ02
081	2lp9-m10_A_A9_G10	NAN	NANT	0	0.83	BB05
082	2lp9-m1_A_A9_G10	NAN	NANT	0	0.87	BA10
083	2lp9-m2_A_A9_G10	NAN	NANT	0	0.85	BA10
084	2lp9-m3_A_A9_G10	NAN	NANT	0	1.00	BA13
085	2lp9-m4_A_A9_G10	NAN	NANT	0	0.71	BB08
086	2lp9-m5_A_A9_G10	NAN	NANT	0	0.87	BB05
087	2lp9-m6_A_A9_G10	NAN	NANT	0	0.70	BB13
088	2lp9-m7_A_A9_G10	NAN	NANT	0	0.51	BB08
089	2lp9-m8_A_A9_G10	NAN	NANT	0	0.82	BB05
090	2lp9-m9_A_A9_G10	NAN	NANT	0	0.66	BB13
091	2lp9-m10_A_G10_A11	NAN	NANT	0	1.17	BB20
092	2lp9-m1_A_G10_A11	NAN	NANT	0	1.30	AB02
093	2lp9-m2_A_G10_A11	NAN	NANT	0	1.31	AB02
094	2lp9-m3_A_G10_A11	NAN	NANT	0	1.27	AB02
095	2lp9-m4_A_G10_A11	NAN	NANT	0	0.72	OP26
096	2lp9-m5_A_G10_A11	NAN	NANT	0	0.53	OP26
097	2lp9-m6_A_G10_A11	NAN	NANT	0	0.74	OP26
098	2lp9-m7_A_G10_A11	NAN	NANT	0	0.71	OP26
099	2lp9-m8_A_G10_A11	NAN	NANT	0	0.56	OP26
100	2lp9-m9_A_G10_A11	NAN	NANT	0	0.66	OP26
101	2lp9-m10_A_A11_U12	NAN	NANT	0	1.62	OP08
102	2lp9-m1_A_A11_U12	NAN	NANT	0	1.55	OP08
103	2lp9-m2_A_A11_U12	NAN	NANT	0	1.55	OP08
104	2lp9-m3_A_A11_U12	NAN	NANT	0	1.09	AA10
105	2lp9-m4_A_A11_U12	NAN	NANT	0	0.98	AA10
106	2lp9-m5_A_A11_U12	NAN	NANT	0	1.07	BA09
107	2lp9-m6_A_A11_U12	NAN	NANT	0	1.01	BA09
108	2lp9-m7_A_A11_U12	NAN	NANT	0	1.03	BA09
109	2lp9-m8_A_A11_U12	NAN	NANT	0	1.09	BA09
110	2lp9-m9_A_A11_U12	NAN	NANT	0	1.25	AA11
111	2lp9-m10_A_U12_C13	AAA	AA00	77	0.24	AA00
112	2lp9-m1_A_U12_C13	AAA	AA00	76	0.24	AA00
113	2lp9-m2_A_U12_C13	AAA	AA00	67	0.31	AA00
114	2lp9-m3_A_U12_C13	AAA	AA00	83	0.20	AA00
115	2lp9-m4_A_U12_C13	AAA	AA00	81	0.27	AA00
116	2lp9-m5_A_U12_C13	AAA	AA00	85	0.24	AA00
117	2lp9-m6_A_U12_C13	AAA	AA00	89	0.22	AA00
118	2lp9-m7_A_U12_C13	AAA	AA00	85	0.25	AA00
119	2lp9-m8_A_U12_C13	AAA	AA00	86	0.23	AA00
120	2lp9-m9_A_U12_C13	AAA	AA00	90	0.21	AA00
121	2lp9-m10_A_C13_U14	AAA	AA00	83	0.20	AA00
122	2lp9-m1_A_C13_U14	AAA	AA00	83	0.20	AA00
123	2lp9-m2_A_C13_U14	AAA	AA00	83	0.22	AA00
124	2lp9-m3_A_C13_U14	AAA	AA00	87	0.18	AA00
125	2lp9-m4_A_C13_U14	AAA	AA00	89	0.18	AA00
126	2lp9-m5_A_C13_U14	AAA	AA00	88	0.18	AA00
127	2lp9-m6_A_C13_U14	AAA	AA00	83	0.27	AA00
128	2lp9-m7_A_C13_U14	AAA	AA00	91	0.18	AA00
129	2lp9-m8_A_C13_U14	AAA	AA00	88	0.18	AA00
130	2lp9-m9_A_C13_U14	AAA	AA00	90	0.17	AA00
131	2lp9-m10_A_U14_U15	AAA	AA00	84	0.19	AA00
132	2lp9-m1_A_U14_U15	AAA	AA00	84	0.19	AA00
133	2lp9-m2_A_U14_U15	AAA	AA00	87	0.17	AA00
134	2lp9-m3_A_U14_U15	AAA	AA00	86	0.18	AA00
135	2lp9-m4_A_U14_U15	AAA	AA00	83	0.20	AA00
136	2lp9-m5_A_U14_U15	AAA	AA00	85	0.19	AA00
137	2lp9-m6_A_U14_U15	AAA	AA00	86	0.18	AA00
138	2lp9-m7_A_U14_U15	AAA	AA00	86	0.18	AA00
139	2lp9-m8_A_U14_U15	AAA	AA00	84	0.19	AA00
140	2lp9-m9_A_U14_U15	AAA	AA00	86	0.18	AA00
141	2lp9-m10_A_U15_C16	AAA	AA00	82	0.20	AA00
142	2lp9-m1_A_U15_C16	AAA	AA00	82	0.19	AA00
143	2lp9-m2_A_U15_C16	AAA	AA00	85	0.18	AA00
144	2lp9-m3_A_U15_C16	AAA	AA00	82	0.19	AA00
145	2lp9-m4_A_U15_C16	AAA	AA00	80	0.21	AA00
146	2lp9-m5_A_U15_C16	AAA	AA00	83	0.20	AA00
147	2lp9-m6_A_U15_C16	AAA	AA00	80	0.21	AA00
148	2lp9-m7_A_U15_C16	AAA	AA00	81	0.20	AA00
149	2lp9-m8_A_U15_C16	AAA	AA00	82	0.19	AA00
150	2lp9-m9_A_U15_C16	AAA	AA00	82	0.20	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 150 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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