DNATCO v4.1: results

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Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2izm_R_U4_G5	NAN	NANT	0	0.91	IC03
02	2izm_R_G5_C6	NAN	NANT	0	1.59	OP11
03	2izm_R_C6_G7	NAN	NANT	0	1.05	OP31
04	2izm_R_G7_G8	AAA	AA00	57	0.25	AA00
05	2izm_R_G8_A9	AAA	AA00	64	0.25	AA00
06	2izm_R_A9_U10	OPN	OP09	45	0.37	OP09
07	2izm_R_U10_C11	NAN	NANT	0	0.54	OP20
08	2izm_R_C11_A12	NAN	NANT	0	1.46	OP22
09	2izm_R_A12_C13	NAN	NANT	0	0.56	OP27
10	2izm_R_C13_C14	AAA	AA00	77	0.21	AA00
11	2izm_R_C14_C15	AAA	AA00	65	0.30	AA00
12	2izm_R_C15_A16	AAA	AA00	88	0.11	AA00
13	2izm_S_U4_G5	NAN	NANT	0	0.82	IC03
14	2izm_S_G5_C6	NAN	NANT	0	1.59	OP11
15	2izm_S_C6_G7	NAN	NANT	0	0.95	OP31
16	2izm_S_G7_G8	AAA	AA00	27	0.34	AA00
17	2izm_S_G8_A9	AAA	AA00	85	0.24	AA00
18	2izm_S_A9_U10	OPN	OP09	75	0.19	OP09
19	2izm_S_U10_C11	NAN	NANT	0	0.42	OP20
20	2izm_S_C11_A12	NAN	NANT	0	1.50	OP22
21	2izm_S_A12_C13	NAN	NANT	0	0.57	OP27
22	2izm_S_C13_C14	AAA	AA00	92	0.10	AA00
23	2izm_S_C14_C15	AAA	AA00	63	0.31	AA00
24	2izm_S_C15_A16	AAA	AA00	55	0.23	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Color by conformation group (pyramids)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N

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