DNATCO v3.2: results

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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.

step number	Step name	CANA	NtC	confal	rmsd
01	2iz8_R_A3_U4	AAA	AA00	78	0.20	AA00
02	2iz8_R_U4_G5	AAA	AA00	75	0.18	AA00
03	2iz8_R_G5_A6	NAN	NANT	0	0.97	OP29
04	2iz8_R_A6_G7	NAN	NANT	0	0.80	OP31
05	2iz8_R_G7_G8	AAA	AA00	51	0.24	AA00
06	2iz8_R_G8_C9	AAA	AA00	58	0.29	AA00
07	2iz8_R_C9_U10	OPN	OP09	65	0.35	OP09
08	2iz8_R_U10_C11	NAN	NANT	0	0.35	OP20
09	2iz8_R_C11_A12	NAN	NANT	0	1.41	OP22
10	2iz8_R_A12_C13	NAN	NANT	0	0.59	OP27
11	2iz8_R_C13_C14	AAA	AA00	59	0.20	AA00
12	2iz8_R_C14_C15	AAA	AA00	89	0.26	AA00
13	2iz8_R_C15_A16	AAA	AA00	97	0.10	AA00
14	2iz8_R_A16_U17	AAA	AA00	59	0.23	AA00
15	2iz8_R_U17_G18	NAN	NANT	0	0.33	AA03
16	2iz8_S_U4_G5	AAA	AA00	59	0.19	AA00
17	2iz8_S_G5_A6	NAN	NANT	0	0.92	OP29
18	2iz8_S_A6_G7	NAN	NANT	0	0.81	OP31
19	2iz8_S_G7_G8	AAA	AA00	11	0.40	AA00
20	2iz8_S_G8_C9	AAA	AA00	30	0.29	AA00
21	2iz8_S_C9_U10	OPN	OP09	67	0.32	OP09
22	2iz8_S_U10_C11	NAN	NANT	0	0.37	OP20
23	2iz8_S_C11_A12	NAN	NANT	0	1.50	OP22
24	2iz8_S_A12_C13	NAN	NANT	0	0.53	OP27
25	2iz8_S_C13_C14	AAA	AA00	92	0.15	AA00
26	2iz8_S_C14_C15	AAA	AA00	87	0.25	AA00
27	2iz8_S_C15_A16	NAN	NANT	0	0.46	AA04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

δ1

ε1

ζ1

α2

β2

γ2

δ2

χ1

χ2

step_torsions

ntC_average

Δ torsions

torsion scores

comments step confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

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