DNATCO v3.2: results

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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.

step number	Step name	CANA	NtC	confal	rmsd
01	2dr7_B_G1_G2	AAA	AA00	75	0.10	AA00
02	2dr7_B_G2_C3	AAA	AA00	90	0.09	AA00
03	2dr7_B_C3_C4	AAA	AA00	67	0.23	AA00
04	2dr7_B_C4_C5	AAA	AA00	84	0.26	AA00
05	2dr7_B_C5_G6	AAA	AA00	75	0.30	AA00
06	2dr7_B_G6_G7	AAw	AA01	75	0.28	AA01
07	2dr7_B_G7_G8	AAA	AA00	17	0.40	AA00
08	2dr7_B_G8_G9	AAw	AA06	63	0.36	AA06
09	2dr7_B_G9_C10	NAN	NANT	0	0.65	AA10
10	2dr7_B_C10_G11	AAA	AA08	61	0.20	AA08
11	2dr7_B_G11_G12	AAA	AA00	78	0.12	AA00
12	2dr7_B_G12_U13	AAA	AA00	82	0.23	AA00
13	2dr7_B_U13_U14	AAA	AA00	88	0.23	AA00
14	2dr7_B_U14_C15	NAN	NANT	0	0.41	OP04
15	2dr7_B_C15_G16	SYN	AAS1	63	0.18	AAS1
16	2dr7_B_G16_A17	NAN	NANT	0	0.45	IC01
17	2dr7_B_A17_U18	NAN	NANT	0	1.17	OP18
18	2dr7_B_U18_U19	AAA	AA08	16	0.56	AA08
19	2dr7_B_U19_C20	NAN	NANT	0	1.43	IC04
20	2dr7_B_C20_C21	AAA	AA08	56	0.36	AA08
21	2dr7_B_C21_G22	AAw	AA01	94	0.17	AA01
22	2dr7_B_G22_C23	AAA	AA00	71	0.20	AA00
23	2dr7_B_C23_C24	AAw	AA01	69	0.33	AA01
24	2dr7_B_C24_C25	AAw	AA11	87	0.32	AA11
25	2dr7_B_C25_U26	AAA	AA08	79	0.40	AA08
26	2dr7_B_U26_G27	AAu	AA12	70	0.31	AA12
27	2dr7_B_G27_G28	AAA	AA00	72	0.12	AA00
28	2dr7_B_G28_G29	AAA	AA00	82	0.12	AA00
29	2dr7_B_G29_C30	AAA	AA00	59	0.21	AA00
30	2dr7_B_C30_C31	AAA	AA00	77	0.21	AA00
31	2dr7_B_C31_A32	AAA	AA00	31	0.23	AA00
32	2dr7_B_A32_C33	NAN	NANT	0	0.58	ZZ01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

δ1

ε1

ζ1

α2

β2

γ2

δ2

χ1

χ2

step_torsions

ntC_average

Δ torsions

torsion scores

comments step confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

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