DNATCO v3.2: results

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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.

step number	Step name	CANA	NtC	confal	rmsd
01	1xst_A_G1_G2	AAA	AA00	35	0.27	AA00
02	1xst_A_G2_A3	AAA	AA08	32	0.39	AA08
03	1xst_A_A3_A4	AAA	AA08	27	0.31	AA08
04	1xst_A_A4_G5	AAA	AA00	61	0.28	AA00
05	1xst_A_G5_A6	NAN	NANT	0	0.85	AA03
06	1xst_A_A6_C7	NAN	NANT	0	0.66	AA10
07	1xst_A_C7_C8	AAu	AA12	27	0.42	AA12
08	1xst_A_C8_G9	AAA	AA00	47	0.32	AA00
09	1xst_A_G9_G10	AAA	AA00	51	0.41	AA00
10	1xst_A_G10_U11	AAu	AA12	25	0.24	AA12
11	1xst_A_U11_C12	AAA	AA00	61	0.29	AA00
12	1xst_A_C12_U13	AAA	AA08	14	0.52	AA08
13	1xst_A_U13_U14	NAN	NANT	0	2.04	OP11
14	1xst_A_U14_C15	NAN	NANT	0	0.63	OP11
15	1xst_A_C15_G16	NAN	NANT	0	0.58	ZZ1S
16	1xst_A_G16_G17	NAN	NANT	0	0.68	AAS1
17	1xst_A_G17_A18	AAA	AA00	51	0.28	AA00
18	1xst_A_A18_C19	AAA	AA08	32	0.45	AA08
19	1xst_A_C19_C20	AAA	AA00	25	0.39	AA00
20	1xst_A_C20_G21	AAA	AA00	61	0.34	AA00
21	1xst_A_G21_G22	AAA	AA00	36	0.35	AA00
22	1xst_A_G22_C23	AAA	AA04	79	0.37	AA04
23	1xst_A_C23_U24	AAA	AA00	50	0.23	AA00
24	1xst_A_U24_U25	AAA	AA00	39	0.31	AA00
25	1xst_A_U25_C26	AAA	AA00	77	0.26	AA00
26	1xst_A_C26_C27	AAA	AA04	70	0.37	AA04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

δ1

ε1

ζ1

α2

β2

γ2

δ2

χ1

χ2

step_torsions

ntC_average

Δ torsions

torsion scores

comments step confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

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