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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

©Jiří Černý & Bohdan Schneider

Crystal Structure of the Jun/CRE Complex

Results of the assignment of 38 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
011jnm_C_DC201_DG202BBBBB00810.23BB00
021jnm_C_DG202_DT203BBBBB00720.26BB00
031jnm_C_DT203_DC204BBBBB00690.29BB00
041jnm_C_DC204_DG205BBBBB00830.39BB00
051jnm_C_DG205_DA206BBBBB00820.21BB00
061jnm_C_DA206_DT207BBwBB02840.14BB02
071jnm_C_DT207_DG208B12BB04420.20BB04
081jnm_C_DG208_DA209BBBBB00900.13BB00
091jnm_C_DA209_DC210BBBBB00730.22BB00
101jnm_C_DC210_DG211BBBBB00730.30BB00
111jnm_C_DG211_DT212BBBBB00670.21BB00
121jnm_C_DT212_DC213BBBBB00680.21BB00
131jnm_C_DC213_DA214BBBBB00810.17BB00
141jnm_C_DA214_DT215BBBBB00800.22BB00
151jnm_C_DT215_DC216BBBBB00380.32BB00
161jnm_C_DC216_DG217BBBBB00680.38BB00
171jnm_C_DG217_DA218BBBBB00940.11BB00
181jnm_C_DA218_DC219BBBBB00880.18BB00
191jnm_C_DC219_DG220BBBBB00590.30BB00
201jnm_D_DC301_DG302BBwBB03750.38BB03
211jnm_D_DG302_DT303BBBBB01710.27BB01
221jnm_D_DT303_DC304BBBBB00460.29BB00
231jnm_D_DC304_DG305BBBBB00640.42BB00
241jnm_D_DG305_DA306BBBBB00890.18BB00
251jnm_D_DA306_DT307BBBBB00780.19BB00
261jnm_D_DT307_DG308B12BB04810.17BB04
271jnm_D_DG308_DA309BBBBB00960.08BB00
281jnm_D_DA309_DC310BBwBB02700.24BB02
291jnm_D_DC310_DG311BBBBB00830.32BB00
301jnm_D_DG311_DT312BBBBB01790.14BB01
311jnm_D_DT312_DC313BBBBB00690.19BB00
321jnm_D_DC313_DA314BBBBB00920.13BB00
331jnm_D_DA314_DT315BBBBB00620.23BB00
341jnm_D_DT315_DC316BBwBB02470.35BB02
351jnm_D_DC316_DG317BBBBB00770.42BB00
361jnm_D_DG317_DA318BBBBB00890.12BB00
371jnm_D_DA318_DC319BBBBB00890.17BB00
381jnm_D_DC319_DG320BBBBB00630.29BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Download

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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