DNATCO v3.2: results

Click the Summary/Torsions/Similar/... tabs for more details.
Center view on step or molecule.
Show reference and contacts	model altloc

Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.

step number	Step name	CANA	NtC	confal	rmsd
01	1gm5_X_DC1_DA2	NAN	NANT	0	0.50	BB00
02	1gm5_X_DA2_DG3	miB	BB15	66	0.23	BB15
03	1gm5_X_DG3_DC4	BBw	BB02	23	0.30	BB02
04	1gm5_X_DC4_DT5	NAN	NANT	0	0.34	BB15
05	1gm5_X_DT5_DC6	BBB	BB00	66	0.30	BB00
06	1gm5_X_DC6_DC7	BBB	BB00	54	0.20	BB00
07	1gm5_X_DC7_DA8	miB	BB15	65	0.32	BB15
08	1gm5_X_DA8_DT9	NAN	NANT	0	0.38	BB15
09	1gm5_X_DT9_DG10	NAN	NANT	0	0.30	BB17
10	1gm5_X_DG10_DA11	NAN	NANT	0	1.51	BB10
11	1gm5_X_DA11_DT12	NAN	NANT	0	0.71	BB04
12	1gm5_Y_DG1_DC2	NAN	NANT	0	0.39	BB00
13	1gm5_Y_DC2_DA3	NAN	NANT	0	0.37	BB00
14	1gm5_Y_DA3_DG4	NAN	NANT	0	0.39	BB17
15	1gm5_Y_DG4_DT5	NAN	NANT	0	0.56	BB03
16	1gm5_Y_DT5_DG6	BBB	BB00	41	0.42	BB00
17	1gm5_Y_DG6_DC7	NAN	NANT	0	0.51	BB02
18	1gm5_Y_DC7_DT8	NAN	NANT	0	0.45	BB15
19	1gm5_Y_DT8_DC9	NAN	NANT	0	0.40	BB01
20	1gm5_Y_DC9_DG10	NAN	NANT	0	0.39	BB01
21	1gm5_Y_DG10_DC11	NAN	NANT	0	1.86	IC07
22	1gm5_Y_DC11_DA12	NAN	NANT	0	0.42	BBS1
23	1gm5_Y_DA12_DT13	BBB	BB00	74	0.23	BB00
24	1gm5_Y_DT13_DG14	BBB	BB00	54	0.32	BB00
25	1gm5_Y_DG14_DG15	B12	BB04	42	0.20	BB04
26	1gm5_Y_DG15_DA16	BBB	BB00	16	0.34	BB00
27	1gm5_Y_DA16_DG17	NAN	NANT	0	0.73	BB13
28	1gm5_Y_DG17_DC18	NAN	NANT	0	0.43	BB17
29	1gm5_Y_DC18_DT19	BBB	BB00	83	0.27	BB00
30	1gm5_Y_DT19_DG20	NAN	NANT	0	0.31	BB00
31	1gm5_Z_DG1_DA2	NAN	NANT	0	0.50	BB00
32	1gm5_Z_DA2_DG3	BBw	BB02	46	0.39	BB02
33	1gm5_Z_DG3_DC4	BBB	BB00	46	0.33	BB00
34	1gm5_Z_DC4_DA5	BBw	BB02	17	0.37	BB02
35	1gm5_Z_DA5_DC6	NAN	NANT	0	0.41	BB01
36	1gm5_Z_DC6_DT7	BBB	BB00	48	0.28	BB00
37	1gm5_Z_DT7_DG8	BBw	BB02	74	0.24	BB02
38	1gm5_Z_DG8_DC9	NAN	NANT	0	0.37	BB02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

δ1

ε1

ζ1

α2

β2

γ2

δ2

χ1

χ2

step_torsions

ntC_average

Δ torsions

torsion scores

comments step confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

Color by conformation group (pyramids)

Color by conformation group (pyramids)

group
visible

Color by NtC (balls)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N