DNATCO v3.2: results

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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.

step number	Step name	CANA	NtC	confal	rmsd
01	1f27_A_A3_C4	AAA	AA00	72	0.23	AA00
02	1f27_A_C4_C5	AAA	AA00	87	0.15	AA00
03	1f27_A_C5_G6	AAA	AA00	94	0.12	AA00
04	1f27_A_G6_U7	A-B	AB05	83	0.00	AB05
05	1f27_A_U7_C8	NAN	NANT	0	0.88	OP14
06	1f27_A_C8_A9	NAN	NANT	0	1.31	BB08
07	1f27_A_A9_G10	NAN	NANT	0	0.97	OP12
08	1f27_A_G10_A11	AAA	AA00	34	0.18	AA00
09	1f27_A_A11_G12	AAA	AA00	73	0.19	AA00
10	1f27_A_G12_G13	AAA	AA00	47	0.31	AA00
11	1f27_A_G13_A14	AAA	AA00	65	0.25	AA00
12	1f27_A_A14_C15	AAA	AA00	77	0.19	AA00
13	1f27_A_C15_A16	AAA	AA08	80	0.28	AA08
14	1f27_A_A16_C17	AAA	AA00	73	0.19	AA00
15	1f27_A_C17_G18	AAA	AA00	83	0.18	AA00
16	1f27_A_G18_G19	AAA	AA00	87	0.23	AA00
17	1f27_A_G19_U20	AAA	AA00	78	0.20	AA00
18	1f27_A_U20_U21	AAA	AA00	87	0.18	AA00
19	1f27_B_A22_A23	NAN	NANT	0	0.36	OP17
20	1f27_B_A23_A24	OPN	OP06	25	0.46	OP06
21	1f27_B_A24_A25	AAA	AA00	90	0.11	AA00
22	1f27_B_A25_A26	AAA	AA00	83	0.26	AA00
23	1f27_B_A26_G27	ICL	IC01	18	0.42	IC01
24	1f27_B_G27_U28	B-A	BA16	43	0.20	BA16
25	1f27_B_U28_C29	AAA	AA00	93	0.15	AA00
26	1f27_B_C29_C30	AAA	AA00	87	0.19	AA00
27	1f27_B_C30_U31	AAA	AA00	96	0.13	AA00
28	1f27_B_U31_C32	AAA	AA00	88	0.20	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

δ1

ε1

ζ1

α2

β2

γ2

δ2

χ1

χ2

step_torsions

ntC_average

Δ torsions

torsion scores

comments step confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

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N