DNATCO v3.2: results

Click the Summary/Torsions/Similar/... tabs for more details.
Center view on step or molecule.
Show reference and contacts	model altloc

Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.

step number	Step name	CANA	NtC	confal	rmsd
01	1etf_A_G41_G42	AAA	AA00	57	0.29	AA00
02	1etf_A_G42_U43	AAA	AA00	71	0.25	AA00
03	1etf_A_U43_C44	AAA	AA00	67	0.22	AA00
04	1etf_A_C44_U45	AAA	AA00	68	0.29	AA00
05	1etf_A_U45_G46	A-B	AB01	46	0.35	AB01
06	1etf_A_G46_G47	NAN	NANT	0	0.50	BA17
07	1etf_A_G47_G48	A-B	AB01	34	0.32	AB01
08	1etf_A_G48_C49	NAN	NANT	0	0.58	BA08
09	1etf_A_C49_G50	AAA	AA00	66	0.28	AA00
10	1etf_A_G50_C51	AAA	AA00	68	0.26	AA00
11	1etf_A_C51_A52	AAA	AA00	70	0.30	AA00
12	1etf_A_A52_G53	AAA	AA00	72	0.21	AA00
13	1etf_A_G53_C54	AAA	AA00	56	0.27	AA00
14	1etf_A_C54_G55	AAA	AA00	58	0.30	AA00
15	1etf_A_G55_C56	NAN	NANT	0	1.25	OP09
16	1etf_A_C56_A57	NAN	NANT	0	0.97	OP12
17	1etf_A_A57_A58	AAA	AA00	33	0.38	AA00
18	1etf_A_A58_G64	NAN	NANT	0	0.66	AA04
19	1etf_A_G64_C65	AAw	AA01	59	0.31	AA01
20	1etf_A_C65_U66	AAA	AA00	75	0.25	AA00
21	1etf_A_U66_G67	AAA	AA00	34	0.32	AA00
22	1etf_A_G67_A68	NAN	NANT	0	1.30	OP17
23	1etf_A_A68_C69	NAN	NANT	0	2.21	OP16
24	1etf_A_C69_G70	AAA	AA00	77	0.25	AA00
25	1etf_A_G70_G71	NAN	NANT	0	0.52	ZZ01
26	1etf_A_G71_U72	NAN	NANT	0	0.60	OP21
27	1etf_A_U72_A73	OPN	OP11	52	0.33	OP11
28	1etf_A_A73_C74	AAA	AA00	36	0.37	AA00
29	1etf_A_C74_A75	AAA	AA00	75	0.27	AA00
30	1etf_A_A75_G76	AAA	AA00	71	0.24	AA00
31	1etf_A_G76_G77	AAA	AA00	61	0.28	AA00
32	1etf_A_G77_C78	AAA	AA00	68	0.22	AA00
33	1etf_A_C78_C79	AAA	AA00	59	0.26	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

δ1

ε1

ζ1

α2

β2

γ2

δ2

χ1

χ2

step_torsions

ntC_average

Δ torsions

torsion scores

comments step confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

Color by conformation group (pyramids)

Color by conformation group (pyramids)

group
visible

Color by NtC (balls)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N