DNATCO[?] v4.1
Assignment of DNA and RNA conformers
Annotation | CANA | NtC | Numbers of Steps in | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | ||||
DNA | RNA | GS, # | |||||||||||||||||
# | % | # | % | δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | C'C' | ||||
the most frequent, canonical A form | AAA | AA00 | 1 805 | 3.1 | 21 177 | 37.1 | 291 | 82 | 206 | 288 | 293 | 173 | 55 | 82 | 199 | 200 | 18 | 4.8 | 5.5 |
A-DNA with B like χ | AAA | AA02 | 595 | 1.0 | 80 | 0.1 | 170 | 88 | 202 | 274 | 293 | 161 | 54 | 88 | 245 | 246 | 18 | 4.7 | 5.2 |
A like, similar to AA00, high α | AAA | AA03 | 32 | 0.1 | 806 | 1.4 | 64 | 80 | 223 | 264 | 337 | 155 | 27 | 80 | 192 | 202 | 16 | 4.9 | 5.7 |
A like, similar to AA00, low α | AAA | AA04 | 148 | 0.3 | 1 830 | 3.2 | 65 | 80 | 202 | 299 | 259 | 175 | 85 | 80 | 199 | 193 | 19 | 4.7 | 5.4 |
A form variant | AAA | AA08 | 150 | 0.3 | 8 527 | 15.0 | 436 | 82 | 233 | 275 | 306 | 153 | 55 | 80 | 189 | 197 | 23 | 4.6 | 5.4 |
A form variant | AAA | AA09 | 22 | 0.0 | 230 | 0.4 | 27 | 87 | 232 | 272 | 302 | 154 | 52 | 85 | 217 | 233 | 24 | 4.7 | 5.4 |
A like, α/ɣ switch (150/180) | AAw | AA01 | 284 | 0.5 | 1 859 | 3.3 | 159 | 81 | 197 | 291 | 149 | 192 | 182 | 85 | 204 | 188 | 14 | 4.7 | 5.3 |
A like, α/ɣ switch (130/180) | AAw | AA05 | 7 | 0.0 | 385 | 0.7 | 51 | 82 | 214 | 291 | 140 | 225 | 182 | 85 | 209 | 184 | 57 | 4.3 | 4.8 |
A like, α/ɣ switch (130/180) | AAw | AA06 | 18 | 0.0 | 513 | 0.9 | 32 | 80 | 214 | 256 | 135 | 229 | 180 | 82 | 196 | 180 | 16 | 4.6 | 5.2 |
A like, α/ɣ switch (210/140) | AAw | AA10 | 15 | 0.0 | 488 | 0.9 | 151 | 79 | 203 | 313 | 210 | 154 | 143 | 80 | 199 | 183 | 13 | 4.8 | 5.4 |
A like, α/ɣ switch (90/190) | AAw | AA11 | 6 | 0.0 | 240 | 0.4 | 34 | 81 | 261 | 226 | 91 | 257 | 192 | 83 | 189 | 179 | 11 | 4.6 | 5.0 |
A form with distant bases, low ζ | AAu | AA07 | 1 | 0.0 | 95 | 0.2 | 41 | 83 | 243 | 216 | 296 | 144 | 53 | 82 | 203 | 203 | 345 | 6.8 | 6.8 |
A like backbone, bases can be intercalated | AAu | AA12 | 7 | 0.0 | 616 | 1.1 | 78 | 82 | 198 | 261 | 298 | 176 | 50 | 81 | 201 | 197 | 354 | 6.2 | 6.4 |
A form with distant bases, low ζ | AAu | AA13 | 0 | 0.0 | 105 | 0.2 | 31 | 83 | 190 | 241 | 307 | 174 | 50 | 83 | 200 | 192 | 343 | 7.3 | 6.9 |
A-B: δ1 C3'-endo, δ2 C2'-endo, χ1/χ2 have A-B pattern | A-B | AB01 | 1 438 | 2.5 | 43 | 0.1 | 67 | 86 | 186 | 281 | 301 | 179 | 54 | 142 | 223 | 256 | 18 | 4.7 | 5.3 |
A-B: δ1 O4'-endo, extremely low ε, χ1/χ2 are B like | A-B | AB02 | 120 | 0.2 | 0 | 0.0 | 22 | 94 | 59 | 56 | 208 | 188 | 66 | 131 | 239 | 250 | 23 | 4.4 | 4.8 |
A-B: similar to AB01 with high α and low ζ, β, ɣ | A-B | AB03 | 627 | 1.1 | 0 | 0.0 | 28 | 103 | 195 | 255 | 321 | 162 | 40 | 136 | 228 | 256 | 23 | 4.6 | 5.1 |
A-B: δ1 C3'-endo, δ2 C2'-endo, χ1/χ2 have A/B pattern, C'C' high | A-B | AB04 | 247 | 0.4 | 189 | 0.3 | 28 | 87 | 215 | 297 | 280 | 209 | 55 | 139 | 194 | 233 | 8 | 5.6 | 6.6 |
A-B: δ1 C3'-endo, δ2 C2'-endo, χ1/χ2 have A/B pattern | A-B | AB05 | 549 | 1.0 | 1 024 | 1.8 | 50 | 83 | 214 | 287 | 303 | 176 | 58 | 145 | 196 | 239 | 17 | 4.8 | 5.7 |
BI-A complex conformer with δ2 from C3' to C4'-exo, χ1/χ2 are B like | B-A | BA01 | 735 | 1.3 | 4 | 0.0 | 36 | 136 | 189 | 255 | 300 | 161 | 53 | 88 | 254 | 225 | 29 | 4.2 | 4.7 |
BI-A complex conformer with δ2 from C3' to C4'-exo, χ1/χ2 are B like | B-A | BA05 | 2 001 | 3.5 | 0 | 0.0 | 70 | 131 | 184 | 269 | 296 | 169 | 52 | 104 | 251 | 235 | 24 | 4.1 | 4.6 |
BI-A: extremely low β~60, α/ɣ switch (260/170), χ2 A like | B-A | BA08 | 668 | 1.2 | 23 | 0.0 | 39 | 139 | 208 | 213 | 301 | 141 | 49 | 89 | 263 | 215 | 33 | 4.4 | 4.9 |
B-A: low β | B-A | BA09 | 143 | 0.2 | 6 | 0.0 | 25 | 134 | 200 | 287 | 256 | 68 | 172 | 90 | 265 | 186 | 23 | 3.8 | 4.0 |
B-A with α~90, ɣ~180, χ1 A like | B-A | BA10 | 129 | 0.2 | 13 | 0.0 | 37 | 136 | 200 | 236 | 95 | 219 | 205 | 90 | 254 | 200 | 28 | 4.0 | 4.4 |
B-A with α~90, ɣ~180, χ1 A like | B-A | BA13 | 158 | 0.3 | 31 | 0.1 | 38 | 142 | 220 | 200 | 81 | 231 | 196 | 88 | 265 | 197 | 31 | 4.2 | 4.6 |
BII-A: χ2 A like | B-A | BA16 | 66 | 0.1 | 54 | 0.1 | 59 | 146 | 246 | 190 | 61 | 229 | 199 | 85 | 266 | 199 | 29 | 4.4 | 4.8 |
BII-A: δ2~O4'-endo, β~130 | B-A | BA17 | 143 | 0.2 | 3 | 0.0 | 30 | 149 | 253 | 177 | 295 | 131 | 44 | 98 | 271 | 233 | 38 | 4.5 | 4.9 |
the most frequent DNA conformer, canonical B form, also called BI | BBB | BB00 | 19 360 | 33.6 | 8 | 0.0 | 1 872 | 138 | 183 | 258 | 304 | 180 | 44 | 138 | 253 | 258 | 26 | 4.4 | 4.9 |
less populated variant of the BI form | BBB | BB01 | 3 558 | 6.2 | 0 | 0.0 | 134 | 131 | 181 | 266 | 301 | 176 | 49 | 120 | 248 | 244 | 26 | 4.3 | 4.9 |
less populated variant of BI form, very low ε, α, β | BBw | BB17 | 191 | 0.3 | 1 | 0.0 | 22 | 129 | 145 | 275 | 230 | 241 | 79 | 136 | 245 | 270 | 24 | 4.6 | 5.2 |
BI with α/ɣ switch (30/300) | BBw | BB02 | 2 362 | 4.1 | 0 | 0.0 | 108 | 141 | 194 | 246 | 31 | 195 | 297 | 150 | 252 | 253 | 22 | 4.5 | 5.1 |
BI form with α/ɣ switch (160/170) | BBw | BB03 | 331 | 0.6 | 0 | 0.0 | 24 | 145 | 175 | 274 | 163 | 166 | 175 | 146 | 241 | 233 | 27 | 4.5 | 5.2 |
B form with α/ɣ switch (120/190) and low ε and ζ | BBw | BB11 | 250 | 0.4 | 1 | 0.0 | 23 | 145 | 199 | 200 | 123 | 227 | 187 | 144 | 256 | 223 | 29 | 4.6 | 5.1 |
B like conformer, χ2 A like | BBw | BB16 | 636 | 1.1 | 2 | 0.0 | 51 | 138 | 221 | 282 | 284 | 173 | 48 | 140 | 204 | 270 | 33 | 4.9 | 5.5 |
Conformer bridging BI and BII forms | B12 | BB04 | 3 584 | 6.2 | 3 | 0.0 | 235 | 140 | 201 | 214 | 315 | 153 | 46 | 140 | 263 | 253 | 29 | 4.6 | 5.1 |
Conformer bridging BI and BII forms with α/ɣ switch (70/220), χ2 A like | B12 | BB05 | 104 | 0.2 | 0 | 0.0 | 16 | 142 | 220 | 197 | 76 | 233 | 213 | 129 | 266 | 208 | 29 | 4.2 | 4.7 |
BII form, typical by ε/ζ switch compared to BI | BB2 | BB07 | 2 774 | 4.8 | 17 | 0.0 | 324 | 144 | 247 | 169 | 297 | 141 | 46 | 141 | 271 | 260 | 46 | 5.0 | 5.2 |
BII form variant with α/ɣ switch (70/210) | BB2 | BB08 | 92 | 0.2 | 6 | 0.0 | 17 | 147 | 249 | 181 | 66 | 225 | 209 | 148 | 270 | 235 | 30 | 4.7 | 5.1 |
B form with extremely low values of α, β, ɣ, and low ε and ζ | miB | BB10 | 901 | 1.6 | 0 | 0.0 | 50 | 138 | 196 | 192 | 22 | 106 | 19 | 129 | 257 | 258 | 26 | 4.4 | 4.9 |
BI like with α/ɣ switch (260/170), low β 70, χ2 A like | miB | BB12 | 456 | 0.8 | 0 | 0.0 | 90 | 140 | 196 | 280 | 257 | 76 | 171 | 140 | 269 | 205 | 24 | 3.9 | 4.2 |
BI like with α/ɣ switch (220/160), low β 70, χ2 A like | miB | BB13 | 242 | 0.4 | 0 | 0.0 | 30 | 143 | 187 | 293 | 219 | 98 | 161 | 146 | 253 | 219 | 25 | 4.4 | 4.9 |
B like with extremely low ε, high β | miB | BB14 | 161 | 0.3 | 0 | 0.0 | 33 | 110 | 104 | 305 | 220 | 255 | 83 | 133 | 259 | 265 | 29 | 4.3 | 4.9 |
BI like with high α (340) and ɣ near 0 | miB | BB15 | 520 | 0.9 | 2 | 0.0 | 37 | 144 | 189 | 257 | 345 | 189 | 350 | 148 | 250 | 262 | 22 | 4.4 | 5.0 |
B like pucker, χ2 A like, unusual combination of ε, ζ, α, ɣ, χ2 | miB | BB20 | 23 | 0.0 | 0 | 0.0 | 12 | 143 | 294 | 110 | 150 | 199 | 54 | 152 | 261 | 185 | 277 | 5.5 | 5.2 |
A-B backbone, parallel distant bases can be intercalated | ICL | IC01 | 16 | 0.0 | 211 | 0.4 | 49 | 83 | 220 | 290 | 297 | 223 | 54 | 145 | 203 | 283 | 11 | 7.2 | 7.5 |
A-B backbone, parallel distant bases can be intercalated | ICL | IC02 | 6 | 0.0 | 86 | 0.2 | 36 | 82 | 222 | 279 | 299 | 225 | 52 | 143 | 201 | 244 | 2 | 7.7 | 7.8 |
A-B backbone, parallel distant bases can be intercalated, α/ɣ switch (70/300), χ2 B like | ICL | IC03 | 1 | 0.0 | 30 | 0.1 | 17 | 81 | 239 | 256 | 69 | 178 | 302 | 145 | 200 | 265 | 359 | 7.5 | 7.8 |
A-B backbone, parallel distant bases can be intercalated, α/ɣ switch (190/180), χ1 B like | ICL | IC04 | 10 | 0.0 | 34 | 0.1 | 25 | 85 | 206 | 287 | 194 | 181 | 183 | 149 | 212 | 244 | 25 | 7.0 | 7.2 |
BII backbone, parallel distant bases can be intercalated | ICL | IC05 | 29 | 0.1 | 7 | 0.0 | 22 | 141 | 255 | 174 | 289 | 178 | 50 | 147 | 273 | 275 | 46 | 7.3 | 7.1 |
B like, parallel distant bases can be intercalated, χ A like | ICL | IC06 | 63 | 0.1 | 13 | 0.0 | 33 | 137 | 236 | 280 | 288 | 174 | 47 | 142 | 207 | 269 | 40 | 6.2 | 6.2 |
A-like intercalated | ICL | IC07 | 0 | 0.0 | 27 | 0.0 | 16 | 84 | 209 | 291 | 176 | 127 | 177 | 83 | 218 | 204 | 333 | 7.5 | 7.4 |
A pucker and χ torsions, unusual combination of backbone torsions, bases distant, parallel, low rise | OPN | OP01 | 0 | 0.0 | 89 | 0.2 | 35 | 83 | 221 | 122 | 279 | 145 | 45 | 82 | 205 | 194 | 195 | 8.3 | 7.4 |
A pucker and χ torsions, unusual combination of backbone torsions, bases distant, angled | OPN | OP02 | 0 | 0.0 | 39 | 0.1 | 12 | 83 | 226 | 156 | 292 | 159 | 43 | 86 | 207 | 176 | 259 | 9.0 | 8.3 |
A pucker and χ torsions, unusual combination of backbone torsions, bases angled, can be intercalated | OPN | OP03 | 0 | 0.0 | 224 | 0.4 | 61 | 78 | 226 | 300 | 175 | 138 | 51 | 84 | 199 | 195 | 202 | 7.5 | 7.5 |
A pucker and χ torsions, unusual combination of backbone torsions, bases angled, can be intercalated | OPN | OP04 | 0 | 0.0 | 299 | 0.5 | 63 | 80 | 221 | 285 | 166 | 171 | 52 | 85 | 206 | 194 | 206 | 7.2 | 7.1 |
A pucker and χ torsions, unusual combination of backbone torsions, bases distant, perpendicular | OPN | OP05 | 0 | 0.0 | 31 | 0.1 | 12 | 78 | 204 | 50 | 69 | 126 | 45 | 84 | 201 | 187 | 264 | 9.1 | 8.9 |
A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant, low rise | OPN | OP06 | 0 | 0.0 | 45 | 0.1 | 25 | 82 | 213 | 143 | 301 | 172 | 48 | 81 | 204 | 201 | 243 | 10.1 | 9.0 |
A pucker and χ torsions, unusual combination of ε, ζ, α, β, low rise | OPN | OP07 | 0 | 0.0 | 67 | 0.1 | 22 | 82 | 247 | 194 | 293 | 149 | 44 | 81 | 196 | 188 | 324 | 7.8 | 7.5 |
A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases parallel, low rise | OPN | OP08 | 0 | 0.0 | 106 | 0.2 | 33 | 80 | 203 | 278 | 252 | 83 | 167 | 84 | 201 | 177 | 318 | 7.2 | 5.9 |
A-B pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant, angled | OPN | OP09 | 0 | 0.0 | 75 | 0.1 | 38 | 82 | 198 | 269 | 203 | 146 | 51 | 148 | 203 | 250 | 163 | 7.8 | 6.7 |
B-A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant, parallel | OPN | OP10 | 2 | 0.0 | 83 | 0.1 | 24 | 147 | 218 | 152 | 289 | 175 | 40 | 87 | 248 | 186 | 36 | 7.8 | 7.3 |
B-A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant, perpendicular | OPN | OP11 | 6 | 0.0 | 281 | 0.5 | 37 | 147 | 267 | 301 | 297 | 187 | 57 | 84 | 235 | 197 | 110 | 8.9 | 7.8 |
B-A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant, angled | OPN | OP12 | 8 | 0.0 | 238 | 0.4 | 37 | 141 | 257 | 285 | 275 | 184 | 43 | 83 | 237 | 191 | 73 | 7.5 | 7.3 |
B-A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant, perpendicular | OPN | OP13 | 0 | 0.0 | 51 | 0.1 | 30 | 146 | 268 | 248 | 62 | 153 | 47 | 86 | 239 | 186 | 189 | 10.5 | 8.9 |
B-A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant, angled | OPN | OP14 | 0 | 0.0 | 57 | 0.1 | 27 | 148 | 270 | 227 | 58 | 196 | 61 | 88 | 259 | 176 | 229 | 9.6 | 8.2 |
B-A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases can pair with each other | OPN | OP15 | 12 | 0.0 | 169 | 0.3 | 45 | 149 | 201 | 151 | 292 | 149 | 41 | 86 | 265 | 188 | 22 | 6.9 | 6.6 |
B-A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant, perpendicular | OPN | OP16 | 0 | 0.0 | 33 | 0.1 | 21 | 147 | 268 | 150 | 309 | 178 | 47 | 80 | 229 | 195 | 101 | 8.9 | 7.4 |
B-A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant, angled | OPN | OP17 | 0 | 0.0 | 24 | 0.0 | 12 | 145 | 267 | 294 | 291 | 138 | 177 | 84 | 234 | 195 | 191 | 10.1 | 7.9 |
B pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant, angled. Similar to OPS1 | OPN | OP18 | 1 | 0.0 | 49 | 0.1 | 34 | 149 | 291 | 106 | 66 | 198 | 55 | 147 | 225 | 242 | 230 | 8.6 | 6.5 |
B pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant | OPN | OP19 | 18 | 0.0 | 2 | 0.0 | 15 | 145 | 225 | 64 | 74 | 186 | 188 | 126 | 250 | 255 | 20 | 8.0 | 7.3 |
B pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant in 4-way junction | OPN | OP20 | 39 | 0.1 | 78 | 0.1 | 22 | 140 | 271 | 283 | 298 | 190 | 56 | 148 | 260 | 217 | 67 | 8.6 | 7.8 |
B pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant in 5'-end dsDNA | OPN | OP21 | 26 | 0.0 | 58 | 0.1 | 21 | 149 | 242 | 80 | 67 | 177 | 62 | 144 | 228 | 244 | 245 | 10.3 | 8.2 |
B pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant angled | OPN | OP22 | 44 | 0.1 | 64 | 0.1 | 36 | 147 | 245 | 126 | 286 | 162 | 49 | 142 | 233 | 231 | 44 | 6.9 | 6.4 |
B-like open, parallel bases | OPN | OP23 | 0 | 0.0 | 56 | 0.1 | 21 | 147 | 260 | 168 | 272 | 80 | 175 | 149 | 221 | 259 | 60 | 7.0 | 5.5 |
B-like open, low χ2, perpendicular bases | OPN | OP24 | 1 | 0.0 | 92 | 0.2 | 53 | 148 | 284 | 96 | 82 | 248 | 190 | 85 | 242 | 185 | 91 | 5.2 | 4.0 |
B-A open, perpendicular bases | OPN | OP25 | 0 | 0.0 | 28 | 0.0 | 21 | 145 | 261 | 178 | 95 | 209 | 63 | 86 | 283 | 192 | 260 | 8.1 | 7.2 |
B-A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases can pair with each other | OPN | OP26 | 1 | 0.0 | 63 | 0.1 | 16 | 145 | 265 | 161 | 211 | 166 | 50 | 81 | 240 | 191 | 16 | 7.0 | 6.9 |
B-A pucker, A-like χ torsions, unusual combination of ε, ζ, α, β, bases distant, angled | OPN | OP27 | 0 | 0.0 | 19 | 0.0 | 12 | 157 | 260 | 71 | 93 | 162 | 170 | 82 | 211 | 195 | 4 | 8.1 | 7.5 |
A-B pucker, A-like χ torsions, unusual combination of ε, ζ, α, β, bases distant, angled | OPN | OP28 | 0 | 0.0 | 37 | 0.1 | 10 | 82 | 226 | 166 | 292 | 159 | 43 | 145 | 196 | 233 | 235 | 8.6 | 7.9 |
A pucker and χ torsions, unusual combination of backbone torsions, bases distant | OPN | OP29 | 0 | 0.0 | 40 | 0.1 | 19 | 82 | 243 | 254 | 72 | 186 | 59 | 86 | 207 | 185 | 144 | 9.6 | 8.6 |
A pucker and χ torsions, unusual combination of backbone torsions, bases distant, parallel | OPN | OP30 | 0 | 0.0 | 14 | 0.0 | 10 | 82 | 244 | 196 | 76 | 171 | 49 | 89 | 197 | 181 | 81 | 10.5 | 9.7 |
A pucker and χ torsions, unusual combination of ε, ζ, α, β, bases distant angled | OPN | OP31 | 0 | 0.0 | 38 | 0.1 | 23 | 83 | 214 | 64 | 67 | 104 | 185 | 82 | 210 | 186 | 56 | 9.6 | 9.3 |
B-A pucker, unusual combination of ε, ζ, α, β, bases perpendicular, first base syn | OPN | OPS1 | 5 | 0.0 | 78 | 0.1 | 23 | 146 | 263 | 289 | 283 | 184 | 53 | 82 | 63 | 192 | 94 | 8.2 | 7.5 |
B pucker, unusual combination of ε, ζ, α, β, bases angled, second base syn | OPN | OP1S | 26 | 0.0 | 0 | 0.0 | 12 | 144 | 207 | 60 | 82 | 203 | 191 | 147 | 242 | 68 | 65 | 7.6 | 7.0 |
A like with first base in syn orientation | SYN | AAS1 | 2 | 0.0 | 125 | 0.2 | 52 | 79 | 221 | 301 | 291 | 171 | 59 | 81 | 15 | 196 | 45 | 4.4 | 5.3 |
A-B, second base syn | SYN | AB1S | 15 | 0.0 | 0 | 0.0 | 15 | 90 | 214 | 280 | 295 | 176 | 56 | 139 | 239 | 68 | 1 | 5.4 | 6.1 |
A-B, second base syn | SYN | AB2S | 4 | 0.0 | 66 | 0.1 | 36 | 84 | 220 | 287 | 307 | 171 | 53 | 140 | 203 | 69 | 11 | 4.8 | 5.7 |
BI like, unusual β and ɣ, second base syn | SYN | BB1S | 29 | 0.1 | 0 | 0.0 | 24 | 139 | 199 | 281 | 306 | 258 | 308 | 151 | 237 | 66 | 357 | 6.5 | 6.6 |
BI like, α 50, ɣ 290,second base syn | SYN | BB2S | 53 | 0.1 | 1 | 0.0 | 20 | 134 | 194 | 223 | 46 | 180 | 290 | 146 | 251 | 66 | 358 | 6.0 | 6.2 |
BI like, first base syn | SYN | BBS1 | 307 | 0.5 | 0 | 0.0 | 38 | 146 | 187 | 274 | 296 | 172 | 52 | 135 | 64 | 260 | 45 | 3.9 | 4.5 |
Z like conformer similar to ZZS2, both bases anti | ZZZ | ZZ01 | 4 | 0.0 | 303 | 0.5 | 237 | 81 | 210 | 49 | 166 | 150 | 49 | 147 | 208 | 226 | 306 | 4.6 | 6.0 |
Z like conformer similar to ZZ1S with α/ɣ switch (230/60), both bases anti | ZZZ | ZZ02 | 0 | 0.0 | 16 | 0.0 | 9 | 144 | 269 | 78 | 229 | 175 | 55 | 86 | 232 | 277 | 61 | 6.2 | 6.2 |
Z form, Y-R step | ZZZ | ZZ1S | 139 | 0.2 | 16 | 0.0 | 24 | 147 | 263 | 76 | 66 | 186 | 178 | 96 | 207 | 61 | 359 | 6.4 | 6.3 |
Z form, Y-R step, δ2 C2'-endo | ZZZ | ZZ2S | 67 | 0.1 | 6 | 0.0 | 43 | 141 | 263 | 71 | 78 | 180 | 185 | 147 | 208 | 77 | 356 | 6.4 | 6.2 |
ZI form, R-Y step | ZZZ | ZZS1 | 100 | 0.2 | 0 | 0.0 | 40 | 97 | 243 | 293 | 210 | 231 | 56 | 144 | 63 | 206 | 332 | 5.7 | 6.8 |
ZII form, R-Y step | ZZZ | ZZS2 | 22 | 0.0 | 0 | 0.0 | 15 | 95 | 187 | 64 | 169 | 162 | 44 | 143 | 56 | 213 | 329 | 5.7 | 6.7 |
Unassigned conformations | NAN | NANT | 10 919 | 18.9 | 15 062 | 26.4 | 0 | ⨯ | ⨯ | ⨯ | ⨯ | ⨯ | ⨯ | ⨯ | ⨯ | ⨯ | ⨯ | ⨯ | ⨯ |
Annotation | CANA | NtC | 57 634 | 100.0 | 57 011 | 100.0 | 6 870 | δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | C'C' |
# | % | # | % | GS, # | |||||||||||||||
DNA | RNA | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
(The first result will be loaded, other results will be then available in the "Browse" tab.)
Contour plots of RSCC vs Cartesian RMSD or Euclidean distance are also available.
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