DNATCO v4.1: results

Crystal structure of the ubiquitin-like domain in the SF3A1 subunit of human U2 snRNP complexed with the stem-loop 4 of U1 snRNA

Results of the assignment of 46 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	8id2_C_G1_G2	AAA	AA00	80	0.16	AA00
02	8id2_C_G2_G3	AAA	AA00	80	0.18	AA00
03	8id2_C_G3_G4	AAA	AA00	77	0.23	AA00
04	8id2_C_G4_A5	AAA	AA00	82	0.18	AA00
05	8id2_C_A5_C6	AAA	AA00	85	0.23	AA00
06	8id2_C_C6_U7	AAA	AA00	26	0.36	AA00
07	8id2_C_U7_G8	AAA	AA08	83	0.18	AA08
08	8id2_C_G8_C9	AAA	AA00	66	0.22	AA00
09	8id2_C_C9_G10	AAA	AA00	78	0.12	AA00
10	8id2_C_G10_U11	AAA	AA00	86	0.24	AA00
11	8id2_C_U11_U12	OPN	OP09	61	0.28	OP09
12	8id2_C_U12_C13	OPN	OP20	71	0.46	OP20
13	8id2_C_C13_G14	ZZZ	ZZ1S	33	0.30	ZZ1S
14	8id2_C_G14_C15	NAN	NANT	0	0.47	AA05
15	8id2_C_C15_G16	AAA	AA08	90	0.16	AA08
16	8id2_C_G16_C17	AAA	AA00	90	0.14	AA00
17	8id2_C_C17_U18	AAA	AA00	85	0.30	AA00
18	8id2_C_U18_U19	AAA	AA00	84	0.17	AA00
19	8id2_C_U19_U20	AAA	AA00	82	0.16	AA00
20	8id2_C_U20_C21	AAw	AA01	64	0.20	AA01
21	8id2_C_C21_C22	AAA	AA00	81	0.13	AA00
22	8id2_C_C22_C23	AAA	AA00	93	0.13	AA00
23	8id2_C_C23_C24	AAA	AA00	88	0.19	AA00
24	8id2_D_G1_G2	AAA	AA00	84	0.11	AA00
25	8id2_D_G2_G3	AAA	AA00	90	0.14	AA00
26	8id2_D_G3_G4	AAA	AA00	70	0.24	AA00
27	8id2_D_G4_A5	AAA	AA00	81	0.20	AA00
28	8id2_D_A5_C6	AAA	AA00	85	0.21	AA00
29	8id2_D_C6_U7	AAA	AA00	20	0.36	AA00
30	8id2_D_U7_G8	AAA	AA08	83	0.17	AA08
31	8id2_D_G8_C9	AAA	AA00	41	0.35	AA00
32	8id2_D_C9_G10	AAA	AA00	69	0.26	AA00
33	8id2_D_G10_U11	AAA	AA00	89	0.20	AA00
34	8id2_D_U11_U12	OPN	OP09	59	0.30	OP09
35	8id2_D_U12_C13	OPN	OP20	71	0.46	OP20
36	8id2_D_C13_G14	ZZZ	ZZ1S	22	0.35	ZZ1S
37	8id2_D_G14_C15	NAN	NANT	0	0.49	AA05
38	8id2_D_C15_G16	AAA	AA08	75	0.22	AA08
39	8id2_D_G16_C17	AAA	AA00	83	0.16	AA00
40	8id2_D_C17_U18	AAA	AA00	75	0.28	AA00
41	8id2_D_U18_U19	AAA	AA00	88	0.13	AA00
42	8id2_D_U19_U20	AAA	AA00	79	0.16	AA00
43	8id2_D_U20_C21	AAw	AA01	73	0.17	AA01
44	8id2_D_C21_C22	AAA	AA00	76	0.15	AA00
45	8id2_D_C22_C23	AAA	AA00	91	0.10	AA00
46	8id2_D_C23_C24	AAA	AA00	95	0.12	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 46 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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