DNATCO v4.1: results

High-resolution crystal structure of the human selenomethionine-derived SepSecS-tRNASec complex

Results of the assignment of 166 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	8g9z_E_G.A1_C.A2	AAA	AA00	44	0.22	AA00
002	8g9z_E_G.B1_C.B2	AAA	AA08	95	0.16	AA08
003	8g9z_E_C.A2_C.A3	NAN	NANT	0	0.53	AB02
004	8g9z_E_C.B2_C.B3	AAA	AA00	72	0.17	AA00
005	8g9z_E_C.A3_C.A4	AAA	AA08	87	0.16	AA08
006	8g9z_E_C.B3_C.B4	AAw	AA06	95	0.18	AA06
007	8g9z_E_C.A4_G.A5	AAA	AA00	26	0.37	AA00
008	8g9z_E_C.B4_G.B5	NAN	NANT	0	0.54	AA10
009	8g9z_E_A.A5.B_U.A6	AAA	AA08	57	0.34	AA08
010	8g9z_E_A.B5.B_U.B6	NAN	NANT	0	0.56	AA06
011	8g9z_E_G.A5.A_A.A5.B	AAw	AA06	74	0.42	AA06
012	8g9z_E_G.A5_G.A5.A	AAw	AA06	56	0.34	AA06
013	8g9z_E_G.B5.A_A.B5.B	AAw	AA11	75	0.36	AA11
014	8g9z_E_G.B5_G.B5.A	AAw	AA11	71	0.37	AA11
015	8g9z_E_U.A6_G.A7	A-B	AB05	66	0.37	AB05
016	8g9z_E_U.B6_G.B7	NAN	NANT	0	0.66	AA11
017	8g9z_E_G.A7_A.A8	NAN	NANT	0	1.56	OP03
018	8g9z_E_G.B7_A.B8	NAN	NANT	0	1.83	OP03
019	8g9z_E_A.A8_U.A9	NAN	NANT	0	1.98	OP19
020	8g9z_E_A.B8_U.B9	NAN	NANT	0	0.97	OP22
021	8g9z_E_U.A9_C.A10	NAN	NANT	0	1.48	OP05
022	8g9z_E_U.B9_C.B10	NAN	NANT	0	1.46	OP05
023	8g9z_E_C.A10_C.A11	AAA	AA00	75	0.17	AA00
024	8g9z_E_C.B10_C.B11	AAA	AA00	75	0.23	AA00
025	8g9z_E_C.A11_U.A12	AAw	AA06	75	0.33	AA06
026	8g9z_E_C.B11_U.B12	AAw	AA11	76	0.29	AA11
027	8g9z_E_U.A12_C.A13	AAA	AA08	77	0.20	AA08
028	8g9z_E_U.B12_C.B13	AAA	AA08	93	0.19	AA08
029	8g9z_E_C.A13_A.A14	AAw	AA10	83	0.26	AA10
030	8g9z_E_C.B13_A.B14	NAN	NANT	0	0.45	AA10
031	8g9z_E_A.A14_G.A15	AAA	AA08	96	0.16	AA08
032	8g9z_E_A.B14_G.B15	AAw	AA11	89	0.33	AA11
033	8g9z_E_G.A15_U.A16	AAA	AA00	82	0.17	AA00
034	8g9z_E_G.B15_U.B16	AAA	AA08	65	0.33	AA08
035	8g9z_E_U.A16_G.A18	NAN	NANT	0	1.73	IC04
036	8g9z_E_U.B16_G.B18	NAN	NANT	0	1.74	IC04
037	8g9z_E_G.A18_G.A19	NAN	NANT	0	0.52	IC06
038	8g9z_E_G.B18_G.B19	NAN	NANT	0	0.75	IC06
039	8g9z_E_G.A19_U.A20	NAN	NANT	0	1.46	OP19
040	8g9z_E_G.B19_U.B20	NAN	NANT	0	1.41	BB14
041	8g9z_E_C.A20.A_U.A21	AAA	AA08	89	0.18	AA08
042	8g9z_E_C.B20.A_U.B21	AAw	AA06	92	0.17	AA06
043	8g9z_E_U.A20_C.A20.A	NAN	NANT	0	1.36	OP23
044	8g9z_E_U.B20_C.B20.A	NAN	NANT	0	1.75	OP16
045	8g9z_E_U.A21_G.A22	NAN	NANT	0	0.52	AB03
046	8g9z_E_U.B21_G.B22	NAN	NANT	0	0.41	AA03
047	8g9z_E_G.A22_G.A23	NAN	NANT	0	0.55	BA08
048	8g9z_E_G.B22_G.B23	AAA	AA00	79	0.15	AA00
049	8g9z_E_G.A23_G.A24	AAw	AA01	57	0.28	AA01
050	8g9z_E_G.B23_G.B24	AAA	AA08	84	0.18	AA08
051	8g9z_E_G.A24_G.A25	AAw	AA11	67	0.40	AA11
052	8g9z_E_G.B24_G.B25	AAw	AA10	49	0.21	AA10
053	8g9z_E_G.A25_U.A26	AAA	AA08	30	0.32	AA08
054	8g9z_E_G.B25_U.B26	AAA	AA08	51	0.27	AA08
055	8g9z_E_U.A26_G.A27	AAA	AA00	72	0.10	AA00
056	8g9z_E_U.B26_G.B27	AAw	AA06	84	0.17	AA06
057	8g9z_E_G.A27_C.A28	AAA	AA00	78	0.15	AA00
058	8g9z_E_G.B27_C.B28	AAA	AA08	66	0.32	AA08
059	8g9z_E_C.A28_A.A29	AAA	AA08	88	0.16	AA08
060	8g9z_E_C.B28_A.B29	AAA	AA08	84	0.13	AA08
061	8g9z_E_A.A29_G.A30	AAw	AA11	54	0.37	AA11
062	8g9z_E_A.B29_G.B30	AAA	AA00	89	0.11	AA00
063	8g9z_E_G.A30_G.A31	AAw	AA01	16	0.32	AA01
064	8g9z_E_G.B30_G.B31	AAw	AA01	51	0.28	AA01
065	8g9z_E_G.A31_C.A32	AAA	AA08	72	0.30	AA08
066	8g9z_E_G.B31_C.B32	AAA	AA08	64	0.30	AA08
067	8g9z_E_A.A36_A.A37	NAN	NANT	0	0.68	AA01
068	8g9z_E_A.B36_A.B37	NAN	NANT	0	0.66	AA10
069	8g9z_E_A.A37_A.A38	NAN	NANT	0	0.82	AA08
070	8g9z_E_A.B37_A.B38	NAN	NANT	0	1.07	AA10
071	8g9z_E_A.A38_C.A39	AAA	AA03	37	0.41	AA03
072	8g9z_E_A.B38_C.B39	NAN	NANT	0	0.61	AA03
073	8g9z_E_C.A39_C.A40	AAA	AA08	56	0.43	AA08
074	8g9z_E_C.B39_C.B40	AAA	AA00	61	0.30	AA00
075	8g9z_E_C.A40_U.A41	AAA	AA08	84	0.16	AA08
076	8g9z_E_C.B40_U.B41	AAA	AA00	78	0.14	AA00
077	8g9z_E_U.A41_G.A42	AAA	AA00	84	0.14	AA00
078	8g9z_E_U.B41_G.B42	AAA	AA00	76	0.17	AA00
079	8g9z_E_G.A42_U.A43	AAA	AA00	82	0.21	AA00
080	8g9z_E_G.B42_U.B43	AAA	AA00	76	0.24	AA00
081	8g9z_E_U.A43_A.A44	A-B	AB05	89	0.18	AB05
082	8g9z_E_U.B43_A.B44	A-B	AB05	88	0.15	AB05
083	8g9z_E_A.A44_G.A45	NAN	NANT	0	1.14	OP16
084	8g9z_E_A.B44_G.B45	NAN	NANT	0	1.09	OP16
085	8g9z_E_G.A45_C.A46	AAA	AA00	82	0.15	AA00
086	8g9z_E_G.B45_C.B46	AAw	AA01	80	0.20	AA01
087	8g9z_E_C.A46_U.A47	AAA	AA00	81	0.13	AA00
088	8g9z_E_C.B46_U.B47	AAA	AA03	85	0.23	AA03
089	8g9z_E_A.A47.E_G.A47.F	NAN	NANT	0	0.54	AA05
090	8g9z_E_A.A47.I_C.A47.J	AAA	AA00	87	0.18	AA00
091	8g9z_E_A.A47.K_G.A47.L	AAw	AA01	80	0.23	AA01
092	8g9z_E_A.B47.E_G.B47.F	AAA	AA08	65	0.39	AA08
093	8g9z_E_A.B47.I_C.B47.J	AAA	AA00	77	0.19	AA00
094	8g9z_E_A.B47.K_G.B47.L	AAA	AA08	96	0.14	AA08
095	8g9z_E_C.A47.C_U.A47.D	AAA	AA00	87	0.25	AA00
096	8g9z_E_C.A47.G_G.A47.H	NAN	NANT	0	0.85	AA10
097	8g9z_E_C.A47.J_A.A47.K	NAN	NANT	0	0.49	AA06
098	8g9z_E_C.B47.C_U.B47.D	AAA	AA00	82	0.28	AA00
099	8g9z_E_C.B47.G_G.B47.H	NAN	NANT	0	0.78	AA10
100	8g9z_E_C.B47.J_A.B47.K	AAw	AA10	71	0.22	AA10
101	8g9z_E_G.A47.A_U.A47.B	AAA	AA00	75	0.10	AA00
102	8g9z_E_G.A47.F_C.A47.G	AAA	AA08	43	0.43	AA08
103	8g9z_E_G.A47.H_A.A47.I	AAA	AA00	89	0.14	AA00
104	8g9z_E_G.A47.L_A.A48	NAN	NANT	0	0.58	AB05
105	8g9z_E_G.B47.A_U.B47.B	AAA	AA08	84	0.14	AA08
106	8g9z_E_G.B47.F_C.B47.G	AAA	AA00	75	0.25	AA00
107	8g9z_E_G.B47.H_A.B47.I	AAA	AA08	85	0.18	AA08
108	8g9z_E_G.B47.L_A.B48	A-B	AB05	35	0.43	AB05
109	8g9z_E_U.A47.B_C.A47.C	AAA	AA08	88	0.13	AA08
110	8g9z_E_U.A47.D_A.A47.E	NAN	NANT	0	0.54	OP04
111	8g9z_E_U.A47_G.A47.A	AAA	AA00	73	0.10	AA00
112	8g9z_E_U.B47.B_C.B47.C	AAA	AA08	84	0.17	AA08
113	8g9z_E_U.B47.D_A.B47.E	OPN	OP03	95	0.20	OP03
114	8g9z_E_U.B47_G.B47.A	AAA	AA08	78	0.25	AA08
115	8g9z_E_A.A48_G.A50	NAN	NANT	0	1.62	OP16
116	8g9z_E_A.B48_G.B50	NAN	NANT	0	0.73	OP21
117	8g9z_E_G.A50_U.A51	AAA	AA00	77	0.17	AA00
118	8g9z_E_G.B50_U.B51	AAA	AA00	54	0.20	AA00
119	8g9z_E_U.A51_G.A52	AAw	AA01	89	0.20	AA01
120	8g9z_E_U.B51_G.B52	AAw	AA01	88	0.19	AA01
121	8g9z_E_G.A52_G.A53	AAA	AA00	85	0.24	AA00
122	8g9z_E_G.B52_G.B53	AAA	AA00	86	0.24	AA00
123	8g9z_E_G.A53_U.A54	AAA	AA00	88	0.15	AA00
124	8g9z_E_G.B53_U.B54	AAA	AA00	70	0.17	AA00
125	8g9z_E_U.A54_U.A55	AAA	AA08	81	0.22	AA08
126	8g9z_E_U.B54_U.B55	AAw	AA01	45	0.38	AA01
127	8g9z_E_U.A55_C.A56	OPN	OP04	94	0.19	OP04
128	8g9z_E_U.B55_C.B56	NAN	NANT	0	0.33	OP04
129	8g9z_E_C.A56_A.A57	AAA	AA00	73	0.35	AA00
130	8g9z_E_C.B56_A.B57	AAA	AA00	78	0.28	AA00
131	8g9z_E_A.A57_A.A58	ICL	IC01	92	0.30	IC01
132	8g9z_E_A.B57_A.B58	ICL	IC01	91	0.30	IC01
133	8g9z_E_A.A58_U.A59	OPN	OP25	93	0.17	OP25
134	8g9z_E_A.B58_U.B59	OPN	OP25	90	0.20	OP25
135	8g9z_E_U.A59_U.A60	A-B	AB05	80	0.34	AB05
136	8g9z_E_U.B59_U.B60	A-B	AB05	72	0.34	AB05
137	8g9z_E_U.A60_C.A61	OPN	OP12	87	0.15	OP12
138	8g9z_E_U.B60_C.B61	OPN	OP12	88	0.13	OP12
139	8g9z_E_C.A61_C.A62	AAA	AA00	85	0.18	AA00
140	8g9z_E_C.B61_C.B62	AAA	AA00	86	0.16	AA00
141	8g9z_E_C.A62_A.A63	AAA	AA00	83	0.16	AA00
142	8g9z_E_C.B62_A.B63	AAA	AA00	85	0.15	AA00
143	8g9z_E_A.A63_C.A64	AAA	AA00	82	0.16	AA00
144	8g9z_E_A.B63_C.B64	AAA	AA00	81	0.17	AA00
145	8g9z_E_C.A64_C.A66	AAA	AA00	97	0.13	AA00
146	8g9z_E_C.B64_C.B66	AAA	AA00	98	0.11	AA00
147	8g9z_E_C.A66_U.A67	AAA	AA00	85	0.19	AA00
148	8g9z_E_C.B66_U.B67	AAA	AA00	90	0.15	AA00
149	8g9z_E_U.A67.A_U.A67.B	AAA	AA08	87	0.18	AA08
150	8g9z_E_U.A67.B_C.A68	AAA	AA00	44	0.23	AA00
151	8g9z_E_U.A67_U.A67.A	AAA	AA08	87	0.16	AA08
152	8g9z_E_U.B67.A_U.B67.B	AAA	AA08	87	0.16	AA08
153	8g9z_E_U.B67.B_C.B68	AAw	AA01	34	0.40	AA01
154	8g9z_E_U.B67_U.B67.A	AAA	AA08	91	0.16	AA08
155	8g9z_E_C.A68_G.A69	AAw	AA01	81	0.15	AA01
156	8g9z_E_C.B68_G.B69	AAw	AA11	86	0.30	AA11
157	8g9z_E_G.A69_G.A70	AAA	AA08	56	0.24	AA08
158	8g9z_E_G.B69_G.B70	AAw	AA11	75	0.34	AA11
159	8g9z_E_G.A70_G.A71	AAA	AA08	87	0.16	AA08
160	8g9z_E_G.B70_G.B71	AAA	AA08	47	0.32	AA08
161	8g9z_E_G.A71_C.A72	AAA	AA00	89	0.15	AA00
162	8g9z_E_G.B71_C.B72	AAA	AA08	83	0.20	AA08
163	8g9z_E_C.A72_G.A73	SYN	AB2S	19	0.34	AB2S
164	8g9z_E_C.B72_G.B73	SYN	AB2S	27	0.33	AB2S
165	8g9z_E_G.A73_C.A74	NAN	NANT	0	1.87	ZZ2S
166	8g9z_E_G.B73_C.B74	NAN	NANT	0	1.74	OP27

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 166 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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