DNATCO v4.1: results

Structure of Lettuce aptamer bound to DFAME

Results of the assignment of 54 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	8fi0_A_DC1_DT2	BBB	BB00	88	0.21	BB00
02	8fi0_A_DT2_DT3	BBB	BB00	58	0.24	BB00
03	8fi0_A_DT3_DA4	B12	BB04	79	0.26	BB04
04	8fi0_A_DA4_DG5	BBB	BB00	55	0.28	BB00
05	8fi0_A_DG5_DT6	BBB	BB00	59	0.27	BB00
06	8fi0_A_DT6_DA.A7	B12	BB04	65	0.32	BB04
07	8fi0_A_DT6_DA.B7	NAN	NANT	0	0.65	AB1S
08	8fi0_A_DA.A7_DG8	BBB	BB00	79	0.14	BB00
09	8fi0_A_DA.B7_DG8	SYN	BBS1	45	0.33	BBS1
10	8fi0_A_DG8_DG9	NAN	NANT	0	1.46	ZZ2S
11	8fi0_A_DG9_DG10	SYN	BBS1	58	0.21	BBS1
12	8fi0_A_DG10_DA11	NAN	NANT	0	0.36	BA08
13	8fi0_A_DA11_DT12	AAA	AA00	74	0.21	AA00
14	8fi0_A_DT12_DG13	AAA	AA08	51	0.39	AA08
15	8fi0_A_DG13_DA14	NAN	NANT	0	1.61	BB2S
16	8fi0_A_DA14_DT15	NAN	NANT	0	0.56	BB03
17	8fi0_A_DT15_DG16	BBw	BB16	54	0.27	BB16
18	8fi0_A_DG16_DC17	NAN	NANT	0	0.68	AB2S
19	8fi0_A_DC17_DG18	NAN	NANT	0	0.78	BB2S
20	8fi0_A_DG18_DG19	SYN	BBS1	24	0.34	BBS1
21	8fi0_A_DG19_DC20	NAN	NANT	0	1.49	BB10
22	8fi0_A_DC20_DA21	BBw	BB16	19	0.42	BB16
23	8fi0_A_DA21_DG22	B12	BB04	21	0.39	BB04
24	8fi0_A_DG22_DT23	BBB	BB01	83	0.14	BB01
25	8fi0_A_DT23_DG24	NAN	NANT	0	1.15	ZZ2S
26	8fi0_A_DG24_DG25	SYN	BBS1	33	0.18	BBS1
27	8fi0_A_DG25_DG26	NAN	NANT	0	0.58	BA08
28	8fi0_A_DG26_DC27	AAA	AA00	86	0.21	AA00
29	8fi0_A_DC27_DT28	AAw	AA10	30	0.43	AA10
30	8fi0_A_DT28_DT29	A-B	AB05	79	0.25	AB05
31	8fi0_A_DT29_DC30	BBB	BB00	71	0.23	BB00
32	8fi0_A_DC30_DG31	B12	BB04	78	0.15	BB04
33	8fi0_A_DG31_DC32	BBB	BB00	72	0.17	BB00
34	8fi0_A_DC32_DA33	BBw	BB11	44	0.53	BB11
35	8fi0_A_DA33_DG34	BBB	BB00	40	0.47	BB00
36	8fi0_A_DG34_DT35	miB	BB10	28	0.35	BB10
37	8fi0_A_DT35_DT36	NAN	NANT	0	0.60	OP21
38	8fi0_A_DT36_DC37	NAN	NANT	0	2.29	OP22
39	8fi0_A_DC37_DC38	NAN	NANT	0	2.15	OP17
40	8fi0_A_DC38_DT39	NAN	NANT	0	2.21	ZZS2
41	8fi0_A_DT39_DG40	NAN	NANT	0	0.63	BB08
42	8fi0_A_DG40_DC41	NAN	NANT	0	0.39	BB10
43	8fi0_A_DC41_DG42	B-A	BA16	30	0.38	BA16
44	8fi0_A_DG42_DA43	ICL	IC02	20	0.54	IC02
45	8fi0_A_DA43_DG44	NAN	NANT	0	0.50	BB08
46	8fi0_A_DG44_DG45	NAN	NANT	0	1.24	BB2S
47	8fi0_A_DG45_DG46	NAN	NANT	0	0.69	AA11
48	8fi0_A_DG46_DG47	AAw	AA06	67	0.43	AA06
49	8fi0_A_DG47_DA48	A-B	AB05	49	0.29	AB05
50	8fi0_A_DA48_DC49	BBB	BB00	64	0.24	BB00
51	8fi0_A_DC49_DT50	miB	BB13	92	0.15	BB13
52	8fi0_A_DT50_DA51	BBw	BB16	32	0.27	BB16
53	8fi0_A_DA51_DA52	BBB	BB00	61	0.33	BB00
54	8fi0_A_DA52_DG53	miB	BB12	39	0.37	BB12

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Results of the assignment of 54 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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