DNATCO v4.1: results

Crystal structure of an i-motif from the HRAS promoter region

Results of the assignment of 50 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	8dhc_A_DC1_DG2	ZZZ	ZZ2S	7	0.33	ZZ2S
02	8dhc_A_DG2_DC3	NAN	NANT	0	0.37	OPS1
03	8dhc_A_DC3_DC4	NAN	NANT	0	0.43	AA12
04	8dhc_A_DC4_DC5	NAN	NANT	0	0.42	IC04
05	8dhc_A_DC5_DG6	BBB	BB00	20	0.61	BB00
06	8dhc_A_DG6_DT7	NAN	NANT	0	1.72	OP06
07	8dhc_A_DT7_DG8	NAN	NANT	0	0.81	OP01
08	8dhc_A_DG8_DC9	NAN	NANT	0	0.72	OP10
09	8dhc_A_DC9_DC10	NAN	NANT	0	0.57	IC04
10	8dhc_A_DC10_DC11	NAN	NANT	0	0.72	IC04
11	8dhc_A_DC11_DT12	NAN	NANT	0	0.74	AB04
12	8dhc_A_DT12_DG13	NAN	NANT	0	0.68	BB16
13	8dhc_A_DG13_DC14	NAN	NANT	0	1.04	OP22
14	8dhc_A_DC14_DG15	NAN	NANT	0	1.48	BB07
15	8dhc_A_DG15_DC16	NAN	NANT	0	0.55	OP12
16	8dhc_A_DC16_DC17	AAA	AA03	12	0.54	AA03
17	8dhc_A_DC17_DC18	NAN	NANT	0	0.61	AB05
18	8dhc_A_DC18_DG19	BBB	BB00	13	0.58	BB00
19	8dhc_A_DG19_DC20	NAN	NANT	0	0.72	OP22
20	8dhc_A_DC20_DA21	NAN	NANT	0	0.63	OP21
21	8dhc_A_DA21_DA22	BBB	BB00	29	0.28	BB00
22	8dhc_A_DA22_DC23	OPN	OP20	38	0.40	OP20
23	8dhc_A_DC23_DC24	NAN	NANT	0	1.00	BA10
24	8dhc_A_DC24_DC25	NAN	NANT	0	0.93	IC06
25	8dhc_A_DC25_DG26	NAN	NANT	0	1.33	BB2S
26	8dhc_B_DC1_DG2	ZZZ	ZZ2S	8	0.29	ZZ2S
27	8dhc_B_DG2_DC3	NAN	NANT	0	0.41	OPS1
28	8dhc_B_DC3_DC4	NAN	NANT	0	0.47	AA12
29	8dhc_B_DC4_DC5	NAN	NANT	0	0.46	IC04
30	8dhc_B_DC5_DG6	BBB	BB00	17	0.62	BB00
31	8dhc_B_DG6_DT7	NAN	NANT	0	1.99	OP19
32	8dhc_B_DT7_DG8	NAN	NANT	0	1.19	OP22
33	8dhc_B_DG8_DC9	NAN	NANT	0	0.82	OP10
34	8dhc_B_DC9_DC10	NAN	NANT	0	0.56	IC04
35	8dhc_B_DC10_DC11	NAN	NANT	0	0.97	BA16
36	8dhc_B_DC11_DT12	ICL	IC02	13	0.48	IC02
37	8dhc_B_DT12_DG13	BBw	BB16	15	0.66	BB16
38	8dhc_B_DG13_DC14	NAN	NANT	0	1.03	OP22
39	8dhc_B_DC14_DG15	NAN	NANT	0	1.56	BB08
40	8dhc_B_DG15_DC16	NAN	NANT	0	1.43	IC03
41	8dhc_B_DC16_DC17	NAN	NANT	0	0.51	AA02
42	8dhc_B_DC17_DC18	NAN	NANT	0	0.71	AA02
43	8dhc_B_DC18_DG19	BBw	BB16	34	0.59	BB16
44	8dhc_B_DG19_DC20	NAN	NANT	0	0.70	OP22
45	8dhc_B_DC20_DA21	NAN	NANT	0	1.03	OP18
46	8dhc_B_DA21_DA22	BBB	BB00	82	0.28	BB00
47	8dhc_B_DA22_DC23	OPN	OP20	38	0.40	OP20
48	8dhc_B_DC23_DC24	NAN	NANT	0	0.82	BB03
49	8dhc_B_DC24_DC25	NAN	NANT	0	0.56	IC04
50	8dhc_B_DC25_DG26	NAN	NANT	0	0.66	IC05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 50 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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