DNATCO v4.1: results

T7 RNA polymerase elongation complex with unnatural base dDs-PaTP pair

Results of the assignment of 91 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	8dh1_A_DG3_DA4	NAN	NANT	0	0.66	AA11
02	8dh1_A_DA4_DA5	BBw	BB16	65	0.41	BB16
03	8dh1_A_DA5_DT6	BBB	BB01	81	0.16	BB01
04	8dh1_A_DT6_DC7	BBB	BB01	55	0.21	BB01
05	8dh1_A_DC7_DG8	NAN	NANT	0	0.24	BB10
06	8dh1_A_DG8_DA9	B-A	BA01	66	0.23	BA01
07	8dh1_A_DA11_DT12	AAA	AA00	95	0.12	AA00
08	8dh1_A_DT12_DC13	AAA	AA00	98	0.18	AA00
09	8dh1_A_DC13_DG14	AAA	AA00	90	0.17	AA00
10	8dh1_A_DG14_DC15	AAA	AA00	92	0.16	AA00
11	8dh1_A_DC15_DC16	AAA	AA00	96	0.16	AA00
12	8dh1_A_DC16_DG17	AAA	AA00	78	0.22	AA00
13	8dh1_A_DG17_DC18	AAA	AA00	58	0.33	AA00
14	8dh1_C_G1_C2	AAA	AA00	88	0.12	AA00
15	8dh1_C_C2_G3	AAA	AA00	91	0.08	AA00
16	8dh1_C_G3_G4	AAA	AA08	53	0.16	AA08
17	8dh1_C_G4_C5	AAA	AA00	87	0.15	AA00
18	8dh1_C_C5_G6	AAA	AA08	87	0.12	AA08
19	8dh1_C_G6_A7	AAA	AA00	90	0.12	AA00
20	8dh1_C_A7_U8	AAA	AA00	56	0.26	AA00
21	8dh1_D_DC3_DG4	B12	BB05	38	0.24	BB05
22	8dh1_D_DG4_DA5	NAN	NANT	0	0.48	BB11
23	8dh1_D_DA5_DT6	BBB	BB01	85	0.21	BB01
24	8dh1_D_DT6_DT7	BBB	BB00	65	0.24	BB00
25	8dh1_D_DT7_DC8	NAN	NANT	0	0.41	BB08
26	8dh1_F_DG2_DG3	BB2	BB07	66	0.19	BB07
27	8dh1_F_DG3_DA4	NAN	NANT	0	0.51	BB04
28	8dh1_F_DA4_DA5	BBw	BB03	56	0.36	BB03
29	8dh1_F_DA5_DT6	miB	BB15	47	0.48	BB15
30	8dh1_F_DT6_DC7	miB	BB10	35	0.40	BB10
31	8dh1_F_DC7_DG8	A-B	AB03	77	0.38	AB03
32	8dh1_F_DG8_DA9	BBB	BB00	60	0.25	BB00
33	8dh1_F_DA11_DT12	AAA	AA00	92	0.14	AA00
34	8dh1_F_DT12_DC13	AAA	AA00	95	0.15	AA00
35	8dh1_F_DC13_DG14	AAA	AA00	92	0.15	AA00
36	8dh1_F_DG14_DC15	AAA	AA00	93	0.14	AA00
37	8dh1_F_DC15_DC16	AAA	AA00	96	0.16	AA00
38	8dh1_F_DC16_DG17	AAA	AA00	78	0.17	AA00
39	8dh1_F_DG17_DC18	NAN	NANT	0	0.40	AA00
40	8dh1_G_G1_C2	AAA	AA00	92	0.13	AA00
41	8dh1_G_C2_G3	AAA	AA00	89	0.10	AA00
42	8dh1_G_G3_G4	AAA	AA00	76	0.14	AA00
43	8dh1_G_G4_C5	AAA	AA08	88	0.15	AA08
44	8dh1_G_C5_G6	AAA	AA00	79	0.12	AA00
45	8dh1_G_G6_A7	AAA	AA00	82	0.15	AA00
46	8dh1_G_A7_U8	AAA	AA08	87	0.12	AA08
47	8dh1_H_DT2_DC3	BBw	BB16	15	0.51	BB16
48	8dh1_H_DC3_DG4	NAN	NANT	0	0.47	BB12
49	8dh1_H_DG4_DA5	NAN	NANT	0	0.59	BB02
50	8dh1_H_DA5_DT6	B-A	BA05	37	0.46	BA05
51	8dh1_H_DT6_DT7	BBB	BB00	53	0.19	BB00
52	8dh1_H_DT7_DC8	B12	BB04	68	0.32	BB04
53	8dh1_H_DC8_DC9	B12	BB04	21	0.51	BB04
54	8dh1_J_DC7_DG8	NAN	NANT	0	1.21	BB11
55	8dh1_J_DG8_DA9	NAN	NANT	0	0.55	BA08
56	8dh1_J_DA11_DT12	AAA	AA00	91	0.14	AA00
57	8dh1_J_DT12_DC13	AAA	AA00	95	0.16	AA00
58	8dh1_J_DC13_DG14	AAA	AA00	96	0.14	AA00
59	8dh1_J_DG14_DC15	AAA	AA00	95	0.11	AA00
60	8dh1_J_DC15_DC16	AAA	AA00	94	0.16	AA00
61	8dh1_J_DC16_DG17	AAA	AA00	93	0.18	AA00
62	8dh1_J_DG17_DC18	A-B	AB05	58	0.30	AB05
63	8dh1_K_G1_C2	AAA	AA00	95	0.11	AA00
64	8dh1_K_C2_G3	AAA	AA00	91	0.09	AA00
65	8dh1_K_G3_G4	AAA	AA00	83	0.10	AA00
66	8dh1_K_G4_C5	AAA	AA00	71	0.16	AA00
67	8dh1_K_C5_G6	AAA	AA00	84	0.11	AA00
68	8dh1_K_G6_A7	AAA	AA00	75	0.20	AA00
69	8dh1_K_A7_U8	AAA	AA08	85	0.10	AA08
70	8dh1_M_DA5_DT6	A-B	AB05	24	0.28	AB05
71	8dh1_M_DT6_DC7	NAN	NANT	0	0.39	BB10
72	8dh1_M_DC7_DG8	B12	BB04	61	0.31	BB04
73	8dh1_M_DG8_DA9	B-A	BA01	43	0.34	BA01
74	8dh1_M_DA11_DT12	AAw	AA01	64	0.37	AA01
75	8dh1_M_DT12_DC13	AAA	AA08	86	0.33	AA08
76	8dh1_M_DC13_DG14	AAA	AA00	86	0.23	AA00
77	8dh1_M_DG14_DC15	AAA	AA00	93	0.18	AA00
78	8dh1_M_DC15_DC16	AAA	AA00	93	0.16	AA00
79	8dh1_M_DC16_DG17	AAw	AA10	40	0.30	AA10
80	8dh1_M_DG17_DC18	AAw	AA01	9	0.44	AA01
81	8dh1_N_G1_C2	AAA	AA00	35	0.34	AA00
82	8dh1_N_C2_G3	AAA	AA00	72	0.20	AA00
83	8dh1_N_G3_G4	AAA	AA00	74	0.15	AA00
84	8dh1_N_G4_C5	AAA	AA00	93	0.12	AA00
85	8dh1_N_C5_G6	AAA	AA00	85	0.10	AA00
86	8dh1_N_G6_A7	AAA	AA00	86	0.16	AA00
87	8dh1_N_A7_U8	AAA	AA00	75	0.22	AA00
88	8dh1_O_DT2_DC3	miB	BB10	74	0.35	BB10
89	8dh1_O_DC3_DG4	NAN	NANT	0	0.66	BB10
90	8dh1_O_DG4_DA5	BBB	BB00	74	0.23	BB00
91	8dh1_O_DA5_DT6	NAN	NANT	0	0.72	BB03

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 91 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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