DNATCO v4.1: results

T7 RNA polymerase elongation complex with unnatural base dDs

Results of the assignment of 79 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	8dh0_A_DT6_DC7	BBB	BB00	67	0.18	BB00
02	8dh0_A_DC7_DG8	miB	BB15	16	0.46	BB15
03	8dh0_A_DG8_DA9	BBB	BB00	52	0.39	BB00
04	8dh0_A_DA11_DT12	AAA	AA00	92	0.16	AA00
05	8dh0_A_DT12_DC13	AAA	AA00	88	0.23	AA00
06	8dh0_A_DC13_DG14	AAw	AA10	54	0.29	AA10
07	8dh0_A_DG14_DC15	AAA	AA08	88	0.16	AA08
08	8dh0_A_DC15_DC16	AAA	AA00	78	0.20	AA00
09	8dh0_A_DC16_DG17	AAA	AA00	89	0.25	AA00
10	8dh0_A_DG17_DC18	AAA	AA00	92	0.22	AA00
11	8dh0_C_G1_C2	AAA	AA00	85	0.15	AA00
12	8dh0_C_C2_G3	AAA	AA00	86	0.11	AA00
13	8dh0_C_G3_G4	AAA	AA08	62	0.14	AA08
14	8dh0_C_G4_C5	AAA	AA00	81	0.19	AA00
15	8dh0_C_C5_G6	AAA	AA08	89	0.15	AA08
16	8dh0_C_G6_A7	AAA	AA00	92	0.15	AA00
17	8dh0_C_A7_U8	AAA	AA08	76	0.19	AA08
18	8dh0_E_DA4_DA5	BBB	BB00	28	0.34	BB00
19	8dh0_E_DA5_DT6	BBB	BB00	44	0.32	BB00
20	8dh0_E_DT6_DC7	miB	BB10	72	0.45	BB10
21	8dh0_E_DC7_DG8	miB	BB15	51	0.32	BB15
22	8dh0_E_DG8_DA9	B12	BB04	25	0.39	BB04
23	8dh0_E_DA11_DT12	AAA	AA00	95	0.12	AA00
24	8dh0_E_DT12_DC13	AAA	AA00	90	0.20	AA00
25	8dh0_E_DC13_DG14	AAA	AA04	92	0.21	AA04
26	8dh0_E_DG14_DC15	AAA	AA08	85	0.19	AA08
27	8dh0_E_DC15_DC16	AAA	AA00	79	0.19	AA00
28	8dh0_E_DC16_DG17	AAA	AA00	76	0.23	AA00
29	8dh0_E_DG17_DC18	AAA	AA04	77	0.29	AA04
30	8dh0_G_G1_C2	AAA	AA08	92	0.14	AA08
31	8dh0_G_C2_G3	AAA	AA08	91	0.17	AA08
32	8dh0_G_G3_G4	AAA	AA08	89	0.17	AA08
33	8dh0_G_G4_C5	AAA	AA00	85	0.13	AA00
34	8dh0_G_C5_G6	AAA	AA08	86	0.15	AA08
35	8dh0_G_G6_A7	AAA	AA00	68	0.17	AA00
36	8dh0_G_A7_U8	AAA	AA08	76	0.17	AA08
37	8dh0_H_DT2_DC3	NAN	NANT	0	0.59	BB00
38	8dh0_H_DC3_DG4	NAN	NANT	0	0.56	BA13
39	8dh0_H_DG4_DA5	AAw	AA05	29	0.54	AA05
40	8dh0_H_DA5_DT6	NAN	NANT	0	0.60	AA08
41	8dh0_H_DT6_DT7	NAN	NANT	0	0.50	BB10
42	8dh0_I_DC7_DG8	NAN	NANT	0	0.56	BB10
43	8dh0_I_DG8_DA9	NAN	NANT	0	0.62	BA09
44	8dh0_I_DA11_DT12	AAA	AA00	87	0.15	AA00
45	8dh0_I_DT12_DC13	AAA	AA00	90	0.18	AA00
46	8dh0_I_DC13_DG14	AAw	AA10	73	0.26	AA10
47	8dh0_I_DG14_DC15	AAA	AA08	70	0.24	AA08
48	8dh0_I_DC15_DC16	AAA	AA00	86	0.17	AA00
49	8dh0_I_DC16_DG17	AAA	AA00	92	0.26	AA00
50	8dh0_I_DG17_DC18	AAA	AA00	75	0.26	AA00
51	8dh0_K_G1_C2	AAA	AA08	74	0.20	AA08
52	8dh0_K_C2_G3	AAA	AA08	83	0.20	AA08
53	8dh0_K_G3_G4	AAA	AA00	65	0.15	AA00
54	8dh0_K_G4_C5	AAA	AA00	73	0.10	AA00
55	8dh0_K_C5_G6	AAA	AA00	83	0.12	AA00
56	8dh0_K_G6_A7	AAA	AA00	80	0.16	AA00
57	8dh0_K_A7_U8	AAA	AA08	76	0.15	AA08
58	8dh0_M_DA5_DT6	B-A	BA05	61	0.39	BA05
59	8dh0_M_DT6_DC7	BBB	BB00	55	0.29	BB00
60	8dh0_M_DC7_DG8	NAN	NANT	0	0.38	BB10
61	8dh0_M_DG8_DA9	B12	BB04	43	0.30	BB04
62	8dh0_M_DA11_DT12	AAA	AA00	62	0.21	AA00
63	8dh0_M_DT12_DC13	AAA	AA00	72	0.20	AA00
64	8dh0_M_DC13_DG14	AAw	AA10	89	0.21	AA10
65	8dh0_M_DG14_DC15	AAA	AA08	76	0.19	AA08
66	8dh0_M_DC15_DC16	AAA	AA00	95	0.12	AA00
67	8dh0_M_DC16_DG17	NAN	NANT	0	0.35	AA10
68	8dh0_M_DG17_DC18	NAN	NANT	0	0.56	AA04
69	8dh0_O_G1_C2	AAA	AA00	70	0.24	AA00
70	8dh0_O_C2_G3	AAA	AA00	89	0.16	AA00
71	8dh0_O_G3_G4	AAA	AA00	79	0.13	AA00
72	8dh0_O_G4_C5	AAA	AA00	84	0.08	AA00
73	8dh0_O_C5_G6	AAA	AA08	88	0.17	AA08
74	8dh0_O_G6_A7	AAA	AA00	81	0.12	AA00
75	8dh0_O_A7_U8	AAA	AA00	82	0.19	AA00
76	8dh0_P_DT2_DC3	NAN	NANT	0	0.54	BB00
77	8dh0_P_DC3_DG4	NAN	NANT	0	0.72	BA10
78	8dh0_P_DG4_DA5	NAN	NANT	0	0.50	AA06
79	8dh0_P_DA5_DT6	A-B	AB05	22	0.38	AB05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 79 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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