DNATCO v4.1: results

Crystal structure of an i-motif from the HRAS promoter region

Results of the assignment of 50 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	8cxf_B_DC1_DG2	ZZZ	ZZ2S	46	0.26	ZZ2S
02	8cxf_B_DG2_DC3	NAN	NANT	0	0.40	OPS1
03	8cxf_B_DC3_CBR4	NAN	NANT	0	0.94	AA07
04	8cxf_B_CBR4_DC5	ICL	IC04	33	0.40	IC04
05	8cxf_B_DC5_DG6	BBB	BB00	12	0.57	BB00
06	8cxf_B_DG6_DT7	NAN	NANT	0	1.87	OP19
07	8cxf_B_DT7_DG8	NAN	NANT	0	1.24	OP22
08	8cxf_B_DG8_DC9	NAN	NANT	0	0.72	OP10
09	8cxf_B_DC9_DC10	NAN	NANT	0	0.50	IC04
10	8cxf_B_DC10_DC11	NAN	NANT	0	0.67	IC04
11	8cxf_B_DC11_DT12	ICL	IC02	19	0.39	IC02
12	8cxf_B_DT12_DG13	BBw	BB16	19	0.60	BB16
13	8cxf_B_DG13_DC14	NAN	NANT	0	0.98	OP22
14	8cxf_B_DC14_DG15	NAN	NANT	0	1.53	BB08
15	8cxf_B_DG15_DC16	NAN	NANT	0	1.42	IC03
16	8cxf_B_DC16_DC17	NAN	NANT	0	0.62	AA04
17	8cxf_B_DC17_DC18	NAN	NANT	0	0.57	AB05
18	8cxf_B_DC18_DG19	BBB	BB00	20	0.52	BB00
19	8cxf_B_DG19_DC20	NAN	NANT	0	0.73	OP22
20	8cxf_B_DC20_DA21	OPN	OP21	27	0.53	OP21
21	8cxf_B_DA21_DA22	BBB	BB00	72	0.29	BB00
22	8cxf_B_DA22_DC23	OPN	OP20	44	0.40	OP20
23	8cxf_B_DC23_DC24	NAN	NANT	0	0.71	IC04
24	8cxf_B_DC24_DC25	NAN	NANT	0	0.57	IC04
25	8cxf_B_DC25_DG26	NAN	NANT	0	0.68	IC05
26	8cxf_A_DC1_DG2	ZZZ	ZZ2S	24	0.32	ZZ2S
27	8cxf_A_DG2_DC3	NAN	NANT	0	0.42	OPS1
28	8cxf_A_DC3_CBR4	NAN	NANT	0	0.93	AA07
29	8cxf_A_CBR4_DC5	ICL	IC04	34	0.38	IC04
30	8cxf_A_DC5_DG6	BBw	BB16	32	0.53	BB16
31	8cxf_A_DG6_DT7	NAN	NANT	0	1.77	OP06
32	8cxf_A_DT7_DG8	NAN	NANT	0	1.85	IC05
33	8cxf_A_DG8_DC9	NAN	NANT	0	0.71	OP10
34	8cxf_A_DC9_DC10	ICL	IC04	16	0.41	IC04
35	8cxf_A_DC10_DC11	NAN	NANT	0	0.75	IC04
36	8cxf_A_DC11_DT12	NAN	NANT	0	0.72	AB04
37	8cxf_A_DT12_DG13	BBw	BB16	20	0.63	BB16
38	8cxf_A_DG13_DC14	NAN	NANT	0	1.02	OP22
39	8cxf_A_DC14_DG15	NAN	NANT	0	1.46	BB07
40	8cxf_A_DG15_DC16	NAN	NANT	0	0.44	OP12
41	8cxf_A_DC16_DC17	NAN	NANT	0	0.32	AA12
42	8cxf_A_DC17_DC18	NAN	NANT	0	0.59	AB05
43	8cxf_A_DC18_DG19	BBB	BB00	16	0.53	BB00
44	8cxf_A_DG19_DC20	NAN	NANT	0	0.71	OP22
45	8cxf_A_DC20_DA21	NAN	NANT	0	1.03	OP18
46	8cxf_A_DA21_DA22	BBB	BB00	88	0.27	BB00
47	8cxf_A_DA22_DC23	OPN	OP20	47	0.42	OP20
48	8cxf_A_DC23_DC24	NAN	NANT	0	0.73	IC04
49	8cxf_A_DC24_DC25	NAN	NANT	0	0.82	IC06
50	8cxf_A_DC25_DG26	NAN	NANT	0	1.47	BB2S

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 50 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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