DNATCO v4.1: results

1.80 A crystal structure of RNA/2'-O-methyl-RNA heteroduplex

Results of the assignment of 45 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	8clm_A_G1_U2	AAA	AA00	89	0.20	AA00
02	8clm_A_U2_C3	AAw	AA01	91	0.22	AA01
03	8clm_A_C3_U4	AAA	AA00	78	0.21	AA00
04	8clm_A_U4_C5	AAA	AA00	91	0.10	AA00
05	8clm_A_C5_C6	AAA	AA00	83	0.15	AA00
06	8clm_A_C6_U7	AAA	AA00	81	0.19	AA00
07	8clm_A_U7_A8	AAA	AA00	84	0.17	AA00
08	8clm_A_A8_G9	AAA	AA00	97	0.14	AA00
09	8clm_D_OMU102_A2M103	AAA	AA00	87	0.21	AA00
10	8clm_D_A2M103_OMG104	AAw	AA01	87	0.20	AA01
11	8clm_D_OMG104_OMG105	AAA	AA00	77	0.17	AA00
12	8clm_D_OMG105_A2M106	AAA	AA00	89	0.17	AA00
13	8clm_D_A2M106_OMG107	AAw	AA01	94	0.12	AA01
14	8clm_D_OMG107_A2M108	AAA	AA00	59	0.24	AA00
15	8clm_D_A2M108_OMC109	AAA	AA00	74	0.21	AA00
16	8clm_B_G1_U2	AAA	AA08	90	0.15	AA08
17	8clm_B_U2_C3	AAA	AA00	89	0.16	AA00
18	8clm_B_C3_U4	AAA	AA00	81	0.23	AA00
19	8clm_B_U4_C5	AAA	AA00	98	0.12	AA00
20	8clm_B_C5_C6	AAA	AA00	92	0.16	AA00
21	8clm_B_C6_U7	AAA	AA00	96	0.18	AA00
22	8clm_B_U7_A8	AAA	AA00	80	0.17	AA00
23	8clm_B_A8_G9	AAA	AA00	59	0.17	AA00
24	8clm_E_OMU102_A2M103	AAA	AA00	65	0.13	AA00
25	8clm_E_A2M103_OMG104	AAA	AA00	81	0.12	AA00
26	8clm_E_OMG104_OMG105	AAA	AA00	42	0.29	AA00
27	8clm_E_OMG105_A2M106	AAA	AA00	91	0.14	AA00
28	8clm_E_A2M106_OMG107	AAA	AA04	82	0.25	AA04
29	8clm_E_OMG107_A2M108	AAA	AA00	52	0.28	AA00
30	8clm_E_A2M108_OMC109	AAA	AA00	95	0.13	AA00
31	8clm_C_G1_U2	AAA	AA00	92	0.12	AA00
32	8clm_C_U2_C3	AAA	AA00	92	0.12	AA00
33	8clm_C_C3_U4	AAA	AA00	92	0.17	AA00
34	8clm_C_U4_C5	AAA	AA00	85	0.15	AA00
35	8clm_C_C5_C6	AAA	AA00	89	0.20	AA00
36	8clm_C_C6_U7	AAA	AA00	94	0.18	AA00
37	8clm_C_U7_A8	AAA	AA00	71	0.19	AA00
38	8clm_C_A8_G9	AAA	AA00	64	0.19	AA00
39	8clm_F_OMU102_A2M103	AAA	AA00	62	0.20	AA00
40	8clm_F_A2M103_OMG104	AAA	AA00	83	0.15	AA00
41	8clm_F_OMG104_OMG105	AAA	AA00	58	0.19	AA00
42	8clm_F_OMG105_A2M106	AAA	AA00	84	0.15	AA00
43	8clm_F_A2M106_OMG107	AAA	AA00	95	0.09	AA00
44	8clm_F_OMG107_A2M108	AAA	AA00	96	0.10	AA00
45	8clm_F_A2M108_OMC109	AAA	AA00	85	0.14	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 45 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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