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Conformers: ABBIImiBZICOPNSYNN
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Crystal structure of FMV N bound to 42-mer ssRNA

Results of the assignment of 41 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
018axf_Q_U1_U2NANNANT00.30 BA10
028axf_Q_U2_U3AAAAA08660.50 AA08
038axf_Q_U3_U4AAAAA08350.57 AA08
048axf_Q_U4_U5AAAAA00870.26 AA00
058axf_Q_U5_U6AAAAA08810.21 AA08
068axf_Q_U6_U7AAAAA00230.28 AA00
078axf_Q_U7_U8NANNANT00.74 IC03
088axf_Q_U8_U9NANNANT00.89 OP16
098axf_Q_U9_U10AAAAA00260.48 AA00
108axf_Q_U10_U11AAwAA06840.31 AA06
118axf_Q_U11_U12AAwAA10250.62 AA10
128axf_Q_U12_U13AAAAA08720.46 AA08
138axf_Q_U13_U14AAAAA08270.64 AA08
148axf_Q_U14_U15AAAAA00760.28 AA00
158axf_Q_U15_U16AAAAA08720.23 AA08
168axf_Q_U16_U17AAAAA00300.32 AA00
178axf_Q_U17_U18NANNANT00.67 IC01
188axf_Q_U18_U19NANNANT00.66 OP16
198axf_Q_U19_U20NANNANT00.74 OP06
208axf_Q_U20_U21NANNANT01.95 OP01
218axf_Q_U21_U22AAwAA05270.40 AA05
228axf_Q_U22_U23AAwAA05450.47 AA05
238axf_Q_U23_U24AAAAA08460.56 AA08
248axf_Q_U24_U25AAAAA08390.60 AA08
258axf_Q_U25_U26AAAAA08890.22 AA08
268axf_Q_U26_U27AAAAA08870.17 AA08
278axf_Q_U27_U28AAAAA08340.36 AA08
288axf_Q_U28_U29ICLIC01190.58 IC01
298axf_Q_U29_U30NANNANT00.88 OP16
308axf_Q_U30_U31AAAAA08790.31 AA08
318axf_Q_U31_U32AAwAA05640.25 AA05
328axf_Q_U32_U33AAwAA01600.32 AA01
338axf_Q_U33_U34AAAAA08750.44 AA08
348axf_Q_U34_U35AAAAA08300.53 AA08
358axf_Q_U35_U36AAAAA08770.28 AA08
368axf_Q_U36_U37AAAAA08850.16 AA08
378axf_Q_U37_U38AAAAA08280.48 AA08
388axf_Q_U38_U39ICLIC01230.67 IC01
398axf_Q_U39_U40OPNOP16260.53 OP16
408axf_Q_U40_U41NANNANT01.57 OP21
418axf_Q_U41_U42NANNANT01.31 IC04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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