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Conformers: ABBIImiBZICOPNSYNN
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Complex Cyp33-RRMdelta alpha : UAAUGUCG RNA

Results of the assignment of 140 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0017zex-m10_B_U1_A2NANNANT01.26 OP20
0027zex-m11_B_U1_A2NANNANT01.29 OP20
0037zex-m12_B_U1_A2NANNANT01.24 OP20
0047zex-m13_B_U1_A2NANNANT01.13 OP20
0057zex-m14_B_U1_A2NANNANT01.26 OP20
0067zex-m15_B_U1_A2NANNANT01.14 OP20
0077zex-m16_B_U1_A2NANNANT01.28 OP20
0087zex-m17_B_U1_A2NANNANT01.31 OP20
0097zex-m18_B_U1_A2NANNANT00.96 IC03
0107zex-m19_B_U1_A2NANNANT01.31 OP20
0117zex-m1_B_U1_A2NANNANT01.25 OP20
0127zex-m20_B_U1_A2NANNANT01.26 OP20
0137zex-m2_B_U1_A2NANNANT01.30 OP20
0147zex-m3_B_U1_A2NANNANT01.15 OP20
0157zex-m4_B_U1_A2NANNANT01.26 OP20
0167zex-m5_B_U1_A2NANNANT01.25 OP20
0177zex-m6_B_U1_A2NANNANT01.25 OP20
0187zex-m7_B_U1_A2NANNANT01.30 OP20
0197zex-m8_B_U1_A2NANNANT01.25 OP20
0207zex-m9_B_U1_A2NANNANT01.22 OP20
0217zex-m10_B_A2_A3NANNANT00.80 IC05
0227zex-m11_B_A2_A3NANNANT00.79 IC05
0237zex-m12_B_A2_A3NANNANT00.70 BA17
0247zex-m13_B_A2_A3NANNANT00.69 BB02
0257zex-m14_B_A2_A3NANNANT00.79 IC05
0267zex-m15_B_A2_A3NANNANT00.69 BB02
0277zex-m16_B_A2_A3NANNANT00.73 BA17
0287zex-m17_B_A2_A3NANNANT00.83 IC05
0297zex-m18_B_A2_A3NANNANT00.61 BA01
0307zex-m19_B_A2_A3NANNANT00.84 IC05
0317zex-m1_B_A2_A3NANNANT00.71 BA17
0327zex-m20_B_A2_A3NANNANT00.82 IC05
0337zex-m2_B_A2_A3NANNANT00.78 IC05
0347zex-m3_B_A2_A3NANNANT00.73 BB02
0357zex-m4_B_A2_A3NANNANT00.84 IC05
0367zex-m5_B_A2_A3NANNANT00.79 IC05
0377zex-m6_B_A2_A3NANNANT00.73 BA17
0387zex-m7_B_A2_A3NANNANT00.83 IC05
0397zex-m8_B_A2_A3NANNANT00.72 BA17
0407zex-m9_B_A2_A3NANNANT00.68 BA17
0417zex-m10_B_A3_U4NANNANT01.28 OP09
0427zex-m11_B_A3_U4NANNANT01.30 OP09
0437zex-m12_B_A3_U4NANNANT01.35 OP09
0447zex-m13_B_A3_U4NANNANT01.35 OP09
0457zex-m14_B_A3_U4NANNANT01.28 OP09
0467zex-m15_B_A3_U4NANNANT01.31 OP09
0477zex-m16_B_A3_U4NANNANT01.26 OP09
0487zex-m17_B_A3_U4NANNANT01.29 OP09
0497zex-m18_B_A3_U4NANNANT01.35 OP09
0507zex-m19_B_A3_U4NANNANT01.32 OP09
0517zex-m1_B_A3_U4NANNANT01.25 OP09
0527zex-m20_B_A3_U4NANNANT01.30 OP09
0537zex-m2_B_A3_U4NANNANT01.30 OP09
0547zex-m3_B_A3_U4NANNANT01.30 OP09
0557zex-m4_B_A3_U4NANNANT01.30 OP09
0567zex-m5_B_A3_U4NANNANT01.27 OP09
0577zex-m6_B_A3_U4NANNANT01.32 OP09
0587zex-m7_B_A3_U4NANNANT01.32 OP09
0597zex-m8_B_A3_U4NANNANT01.33 OP09
0607zex-m9_B_A3_U4NANNANT01.34 OP09
0617zex-m10_B_U4_G5NANNANT00.99 OP13
0627zex-m11_B_U4_G5NANNANT00.96 OP13
0637zex-m12_B_U4_G5NANNANT00.91 OP13
0647zex-m13_B_U4_G5NANNANT00.89 OP13
0657zex-m14_B_U4_G5NANNANT01.88 OP16
0667zex-m15_B_U4_G5NANNANT01.96 OP16
0677zex-m16_B_U4_G5NANNANT01.87 OP16
0687zex-m17_B_U4_G5NANNANT00.94 OP13
0697zex-m18_B_U4_G5NANNANT00.91 OP13
0707zex-m19_B_U4_G5NANNANT00.97 OP13
0717zex-m1_B_U4_G5NANNANT01.88 OP16
0727zex-m20_B_U4_G5NANNANT00.96 OP13
0737zex-m2_B_U4_G5NANNANT00.96 OP13
0747zex-m3_B_U4_G5NANNANT00.94 OP13
0757zex-m4_B_U4_G5NANNANT01.04 OP13
0767zex-m5_B_U4_G5NANNANT00.97 OP13
0777zex-m6_B_U4_G5NANNANT00.95 OP13
0787zex-m7_B_U4_G5NANNANT00.97 OP13
0797zex-m8_B_U4_G5NANNANT00.92 OP13
0807zex-m9_B_U4_G5NANNANT00.89 OP13
0817zex-m10_B_G5_U6NANNANT01.37 OP06
0827zex-m11_B_G5_U6NANNANT01.43 OP06
0837zex-m12_B_G5_U6NANNANT01.32 OP06
0847zex-m13_B_G5_U6NANNANT01.33 OP06
0857zex-m14_B_G5_U6NANNANT01.36 OP06
0867zex-m15_B_G5_U6NANNANT01.38 OP06
0877zex-m16_B_G5_U6NANNANT01.35 OP06
0887zex-m17_B_G5_U6NANNANT01.40 OP06
0897zex-m18_B_G5_U6NANNANT01.38 OP06
0907zex-m19_B_G5_U6NANNANT01.31 OP06
0917zex-m1_B_G5_U6NANNANT01.38 OP06
0927zex-m20_B_G5_U6NANNANT01.31 OP06
0937zex-m2_B_G5_U6NANNANT01.43 OP06
0947zex-m3_B_G5_U6NANNANT01.41 OP06
0957zex-m4_B_G5_U6NANNANT01.67 OP31
0967zex-m5_B_G5_U6NANNANT01.38 OP06
0977zex-m6_B_G5_U6NANNANT01.36 OP06
0987zex-m7_B_G5_U6NANNANT01.24 OP06
0997zex-m8_B_G5_U6NANNANT01.38 OP06
1007zex-m9_B_G5_U6NANNANT01.34 OP06
1017zex-m10_B_U6_C7NANNANT01.00 BB08
1027zex-m11_B_U6_C7NANNANT01.33 OP21
1037zex-m12_B_U6_C7NANNANT01.02 BB08
1047zex-m13_B_U6_C7NANNANT01.65 IC04
1057zex-m14_B_U6_C7NANNANT00.71 OP17
1067zex-m15_B_U6_C7NANNANT00.72 OP17
1077zex-m16_B_U6_C7NANNANT01.08 BB08
1087zex-m17_B_U6_C7NANNANT01.43 IC03
1097zex-m18_B_U6_C7NANNANT00.71 OP27
1107zex-m19_B_U6_C7NANNANT00.96 BB08
1117zex-m1_B_U6_C7NANNANT01.46 ZZ2S
1127zex-m20_B_U6_C7NANNANT01.43 IC03
1137zex-m2_B_U6_C7NANNANT02.48 OP28
1147zex-m3_B_U6_C7NANNANT01.84 OP19
1157zex-m4_B_U6_C7NANNANT00.58 OP17
1167zex-m5_B_U6_C7NANNANT00.92 BB08
1177zex-m6_B_U6_C7NANNANT02.35 OP28
1187zex-m7_B_U6_C7NANNANT01.73 OP19
1197zex-m8_B_U6_C7NANNANT01.06 BB08
1207zex-m9_B_U6_C7NANNANT01.72 OP19
1217zex-m10_B_C7_G8NANNANT01.51 OP17
1227zex-m11_B_C7_G8NANNANT01.06 OP19
1237zex-m12_B_C7_G8NANNANT01.07 OP19
1247zex-m13_B_C7_G8NANNANT00.81 OP22
1257zex-m14_B_C7_G8NANNANT01.24 OP17
1267zex-m15_B_C7_G8NANNANT01.28 OP17
1277zex-m16_B_C7_G8NANNANT01.61 OP17
1287zex-m17_B_C7_G8NANNANT01.63 OP17
1297zex-m18_B_C7_G8NANNANT00.96 ZZ2S
1307zex-m19_B_C7_G8NANNANT01.54 OP17
1317zex-m1_B_C7_G8NANNANT01.39 OP19
1327zex-m20_B_C7_G8NANNANT01.62 OP19
1337zex-m2_B_C7_G8NANNANT01.57 OP19
1347zex-m3_B_C7_G8NANNANT01.23 IC05
1357zex-m4_B_C7_G8NANNANT01.63 OP19
1367zex-m5_B_C7_G8NANNANT00.82 OP13
1377zex-m6_B_C7_G8NANNANT01.01 ZZ2S
1387zex-m7_B_C7_G8NANNANT01.41 IC04
1397zex-m8_B_C7_G8NANNANT00.83 OP13
1407zex-m9_B_C7_G8NANNANT01.65 OP19

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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