DNATCO v4.1: results

Crystal Structure of tRNAVal from Sulfolobus Tokodaii(Dephosphorylated)

Results of the assignment of 134 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	7vnw_A_G1_G2	AAA	AA08	80	0.21	AA08
002	7vnw_A_G2_G3	AAA	AA00	85	0.12	AA00
003	7vnw_A_G3_C4	AAA	AA00	83	0.18	AA00
004	7vnw_A_C4_C5	AAw	AA06	63	0.31	AA06
005	7vnw_A_G7_U8	OPN	OP11	76	0.34	OP11
006	7vnw_A_U8_C9	NAN	NANT	0	1.03	IC03
007	7vnw_A_C9_2MG10	NAN	NANT	0	1.15	OP12
008	7vnw_A_2MG10_U11	AAA	AA00	32	0.25	AA00
009	7vnw_A_U11_C12	AAA	AA00	91	0.19	AA00
010	7vnw_A_C16_OMC17	NAN	NANT	0	0.51	OP12
011	7vnw_A_OMC17_U17.A	ZZZ	ZZ01	74	0.26	ZZ01
012	7vnw_A_U17.A_G18	NAN	NANT	0	0.58	OP13
013	7vnw_A_G18_G19	NAN	NANT	0	0.98	BB02
014	7vnw_A_G19_U20	NAN	NANT	0	1.94	OP19
015	7vnw_A_U20.A_A21	NAN	NANT	0	0.45	OP14
016	7vnw_A_U20_U20.A	NAN	NANT	0	1.96	OP20
017	7vnw_A_A21_G22	NAN	NANT	0	0.74	IC07
018	7vnw_A_G22_G23	AAA	AA08	31	0.26	AA08
019	7vnw_A_G23_A24	AAA	AA00	96	0.11	AA00
020	7vnw_A_A24_C25	AAA	AA08	87	0.16	AA08
021	7vnw_A_C25_M2G26	AAA	AA08	85	0.21	AA08
022	7vnw_A_M2G26_C27	AAA	AA00	62	0.31	AA00
023	7vnw_A_C27_C28	AAA	AA00	89	0.15	AA00
024	7vnw_A_C28_G29	AAA	AA08	83	0.18	AA08
025	7vnw_A_G29_C30	AAA	AA08	85	0.15	AA08
026	7vnw_A_C30_C31	AAA	AA00	88	0.15	AA00
027	7vnw_A_C31_OMC32	AAA	AA00	31	0.35	AA00
028	7vnw_A_OMC32_U33	AAA	AA00	22	0.53	AA00
029	7vnw_A_U33_OMU34	NAN	NANT	0	0.49	OP04
030	7vnw_A_OMU34_A35	AAA	AA09	7	0.46	AA09
031	7vnw_A_A35_C36	NAN	NANT	0	0.37	AA04
032	7vnw_A_C36_A37	AAA	AA08	76	0.31	AA08
033	7vnw_A_A37_A38	AAA	AA08	68	0.29	AA08
034	7vnw_A_A38_G39	AAA	AA00	30	0.40	AA00
035	7vnw_A_G39_G40	AAA	AA00	81	0.10	AA00
036	7vnw_A_G40_C41	AAA	AA00	93	0.12	AA00
037	7vnw_A_C41_G42	AAA	AA00	79	0.17	AA00
038	7vnw_A_G42_G43	AAA	AA00	86	0.14	AA00
039	7vnw_A_G43_A44	AAA	AA08	78	0.29	AA08
040	7vnw_A_A44_G45	AAA	AA08	69	0.32	AA08
041	7vnw_A_G45_G46	NAN	NANT	0	0.57	IC02
042	7vnw_A_G46_U47	NAN	NANT	0	0.89	IC03
043	7vnw_A_U47_5MC48	NAN	NANT	0	0.90	ZZ02
044	7vnw_A_5MC48_5MC49	NAN	NANT	0	1.30	OP05
045	7vnw_A_5MC49_U50	AAA	AA00	53	0.14	AA00
046	7vnw_A_U50_G51	AAA	AA08	66	0.25	AA08
047	7vnw_A_G51_G52	AAA	AA00	77	0.19	AA00
048	7vnw_A_G52_G53	AAA	AA00	63	0.28	AA00
049	7vnw_A_G53_U54	AAA	AA00	82	0.20	AA00
050	7vnw_A_1MA58_G59	OPN	OP25	64	0.18	OP25
051	7vnw_A_G59_U60	A-B	AB05	80	0.29	AB05
052	7vnw_A_U60_C61	OPN	OP12	91	0.14	OP12
053	7vnw_A_C61_C62	AAA	AA00	29	0.29	AA00
054	7vnw_A_C62_C63	AAA	AA00	77	0.20	AA00
055	7vnw_A_C63_A64	AAA	AA00	75	0.23	AA00
056	7vnw_A_A64_G65	AAA	AA00	79	0.15	AA00
057	7vnw_A_G65_C66	AAA	AA00	65	0.16	AA00
058	7vnw_A_C66_G67	AAA	AA08	87	0.17	AA08
059	7vnw_A_G67_G68	AAA	AA00	86	0.23	AA00
060	7vnw_A_G68_G69	AAw	AA10	83	0.29	AA10
061	7vnw_A_G69_C70	AAA	AA08	51	0.27	AA08
062	7vnw_A_C70_C71	AAA	AA00	71	0.17	AA00
063	7vnw_A_C71_C72	AAA	AA00	82	0.19	AA00
064	7vnw_A_C72_A73	AAA	AA08	81	0.28	AA08
065	7vnw_A_A73_C74	AAA	AA00	82	0.17	AA00
066	7vnw_A_C74_C75	AAA	AA00	42	0.35	AA00
067	7vnw_A_C75_A76	AAA	AA00	37	0.43	AA00
068	7vnw_B_G1_G2	AAA	AA00	59	0.16	AA00
069	7vnw_B_G2_G3	AAA	AA08	84	0.20	AA08
070	7vnw_B_G3_C4	AAA	AA00	66	0.10	AA00
071	7vnw_B_C4_C5	AAA	AA00	48	0.22	AA00
072	7vnw_B_G7_U8	OPN	OP11	84	0.25	OP11
073	7vnw_B_U8_C9	NAN	NANT	0	0.63	IC07
074	7vnw_B_C9_2MG10	NAN	NANT	0	1.06	OP12
075	7vnw_B_2MG10_U11	AAA	AA08	75	0.15	AA08
076	7vnw_B_U11_C12	AAA	AA03	98	0.12	AA03
077	7vnw_B_C16_OMC17	NAN	NANT	0	0.58	OP12
078	7vnw_B_OMC17_U17.A	ZZZ	ZZ01	92	0.16	ZZ01
079	7vnw_B_U17.A_G18	NAN	NANT	0	0.57	OP13
080	7vnw_B_G18_G19	NAN	NANT	0	0.51	IC06
081	7vnw_B_G19_U20	NAN	NANT	0	0.62	OP12
082	7vnw_B_U20.A_A21	NAN	NANT	0	0.70	OP14
083	7vnw_B_U20_U20.A	NAN	NANT	0	1.84	OP06
084	7vnw_B_A21_G22	AAu	AA13	41	0.30	AA13
085	7vnw_B_G22_G23	AAA	AA00	82	0.15	AA00
086	7vnw_B_G23_A24	AAA	AA00	90	0.13	AA00
087	7vnw_B_A24_C25	AAA	AA00	81	0.18	AA00
088	7vnw_B_C25_M2G26	AAA	AA08	82	0.24	AA08
089	7vnw_B_M2G26_C27	AAA	AA08	73	0.18	AA08
090	7vnw_B_C27_C28	AAA	AA08	84	0.18	AA08
091	7vnw_B_C28_G29	AAA	AA00	88	0.15	AA00
092	7vnw_B_G29_C30	AAA	AA00	86	0.14	AA00
093	7vnw_B_C30_C31	AAA	AA00	65	0.16	AA00
094	7vnw_B_C31_OMC32	AAA	AA00	90	0.18	AA00
095	7vnw_B_OMC32_U33	AAA	AA08	90	0.21	AA08
096	7vnw_B_U33_OMU34	NAN	NANT	0	0.67	OP03
097	7vnw_B_OMU34_A35	AAA	AA08	73	0.28	AA08
098	7vnw_B_A35_C36	AAw	AA11	56	0.33	AA11
099	7vnw_B_C36_A37	NAN	NANT	0	0.57	AA05
100	7vnw_B_A37_A38	NAN	NANT	0	0.59	AA04
101	7vnw_B_A38_G39	AAA	AA00	50	0.40	AA00
102	7vnw_B_G39_G40	AAA	AA00	79	0.21	AA00
103	7vnw_B_G40_C41	AAA	AA08	79	0.26	AA08
104	7vnw_B_C41_G42	AAA	AA00	88	0.12	AA00
105	7vnw_B_G42_G43	AAA	AA00	51	0.24	AA00
106	7vnw_B_G43_A44	AAA	AA00	78	0.23	AA00
107	7vnw_B_A44_G45	AAA	AA08	86	0.27	AA08
108	7vnw_B_G45_G46	NAN	NANT	0	0.68	IC07
109	7vnw_B_G46_U47	NAN	NANT	0	1.87	BB2S
110	7vnw_B_U47_5MC48	NAN	NANT	0	0.79	OP15
111	7vnw_B_5MC48_5MC49	NAN	NANT	0	1.31	OP05
112	7vnw_B_5MC49_U50	AAA	AA00	48	0.24	AA00
113	7vnw_B_U50_G51	AAA	AA00	89	0.13	AA00
114	7vnw_B_G51_G52	AAA	AA00	74	0.12	AA00
115	7vnw_B_G52_G53	AAA	AA00	71	0.22	AA00
116	7vnw_B_G53_U54	AAA	AA00	59	0.22	AA00
117	7vnw_B_1MA58_G59	OPN	OP25	32	0.28	OP25
118	7vnw_B_G59_U60	A-B	AB05	73	0.36	AB05
119	7vnw_B_U60_C61	OPN	OP12	91	0.15	OP12
120	7vnw_B_C61_C62	AAA	AA00	75	0.21	AA00
121	7vnw_B_C62_C63	AAA	AA00	71	0.19	AA00
122	7vnw_B_C63_A64	AAA	AA00	73	0.22	AA00
123	7vnw_B_A64_G65	AAA	AA08	77	0.20	AA08
124	7vnw_B_G65_C66	AAA	AA08	87	0.17	AA08
125	7vnw_B_C66_G67	AAA	AA00	59	0.18	AA00
126	7vnw_B_G67_G68	AAA	AA08	86	0.13	AA08
127	7vnw_B_G68_G69	AAA	AA00	76	0.18	AA00
128	7vnw_B_G69_C70	AAA	AA00	78	0.19	AA00
129	7vnw_B_C70_C71	AAA	AA00	79	0.20	AA00
130	7vnw_B_C71_C72	AAA	AA00	88	0.17	AA00
131	7vnw_B_C72_A73	AAA	AA08	92	0.17	AA08
132	7vnw_B_A73_C74	AAA	AA00	51	0.27	AA00
133	7vnw_B_C74_C75	AAA	AA08	70	0.44	AA08
134	7vnw_B_C75_A76	NAN	NANT	0	1.05	OP1S

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 134 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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