DNATCO v4.1: results

Crystal Structure of tRNAVal from Sulfolobus Tokodaii

Results of the assignment of 134 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	7vnv_A_G1_G2	AAA	AA00	61	0.15	AA00
002	7vnv_A_G2_G3	AAA	AA00	87	0.15	AA00
003	7vnv_A_G3_C4	AAA	AA00	82	0.17	AA00
004	7vnv_A_C4_C5	AAA	AA00	66	0.29	AA00
005	7vnv_A_G7_4SU8	OPN	OP11	90	0.26	OP11
006	7vnv_A_4SU8_C9	NAN	NANT	0	0.59	IC07
007	7vnv_A_C9_2MG10	NAN	NANT	0	1.19	OP12
008	7vnv_A_2MG10_U11	AAA	AA00	62	0.18	AA00
009	7vnv_A_U11_C12	AAA	AA00	93	0.14	AA00
010	7vnv_A_C16_OMC17	OPN	OP12	24	0.62	OP12
011	7vnv_A_OMC17_U17.A	ZZZ	ZZ01	93	0.17	ZZ01
012	7vnv_A_U17.A_G18	NAN	NANT	0	0.52	OP13
013	7vnv_A_G18_G19	NAN	NANT	0	0.47	IC06
014	7vnv_A_G19_U20	NAN	NANT	0	1.30	IC04
015	7vnv_A_U20.A_A21	NAN	NANT	0	0.80	OP13
016	7vnv_A_U20_U20.A	NAN	NANT	0	1.42	IC06
017	7vnv_A_A21_G22	NAN	NANT	0	0.67	IC07
018	7vnv_A_G22_G23	AAA	AA08	78	0.17	AA08
019	7vnv_A_G23_A24	AAA	AA00	86	0.10	AA00
020	7vnv_A_A24_C25	AAA	AA00	82	0.18	AA00
021	7vnv_A_C25_M2G26	AAA	AA00	80	0.26	AA00
022	7vnv_A_M2G26_C27	AAA	AA00	63	0.31	AA00
023	7vnv_A_C27_C28	AAA	AA00	83	0.14	AA00
024	7vnv_A_C28_G29	AAA	AA00	82	0.10	AA00
025	7vnv_A_G29_C30	AAA	AA00	86	0.12	AA00
026	7vnv_A_C30_C31	AAA	AA00	95	0.17	AA00
027	7vnv_A_C31_OMC32	AAA	AA00	64	0.30	AA00
028	7vnv_A_OMC32_U33	AAA	AA00	30	0.46	AA00
029	7vnv_A_U33_OMU34	OPN	OP04	77	0.21	OP04
030	7vnv_A_OMU34_A35	AAA	AA00	55	0.36	AA00
031	7vnv_A_A35_C36	AAw	AA06	77	0.19	AA06
032	7vnv_A_C36_A37	AAA	AA08	48	0.37	AA08
033	7vnv_A_A37_A38	AAA	AA08	80	0.23	AA08
034	7vnv_A_A38_G39	AAA	AA00	45	0.42	AA00
035	7vnv_A_G39_G40	AAA	AA00	94	0.10	AA00
036	7vnv_A_G40_C41	AAA	AA00	95	0.13	AA00
037	7vnv_A_C41_G42	AAA	AA00	90	0.13	AA00
038	7vnv_A_G42_G43	AAA	AA00	66	0.19	AA00
039	7vnv_A_G43_A44	AAA	AA08	83	0.25	AA08
040	7vnv_A_A44_G45	AAA	AA00	62	0.34	AA00
041	7vnv_A_G45_G46	NAN	NANT	0	0.95	AA07
042	7vnv_A_G46_9QV47	NAN	NANT	0	0.60	AB05
043	7vnv_A_9QV47_5MC48	OPN	OP22	19	0.30	OP22
044	7vnv_A_5MC48_5MC49	NAN	NANT	0	1.40	OP05
045	7vnv_A_5MC49_U50	AAA	AA00	78	0.21	AA00
046	7vnv_A_U50_G51	AAA	AA00	91	0.10	AA00
047	7vnv_A_G51_G52	AAA	AA04	84	0.20	AA04
048	7vnv_A_G52_G53	AAA	AA00	81	0.22	AA00
049	7vnv_A_G53_SUR54	AAA	AA00	85	0.20	AA00
050	7vnv_A_1MA58_G59	OPN	OP25	72	0.22	OP25
051	7vnv_A_G59_U60	A-B	AB05	65	0.36	AB05
052	7vnv_A_U60_C61	OPN	OP12	94	0.09	OP12
053	7vnv_A_C61_C62	AAA	AA00	79	0.20	AA00
054	7vnv_A_C62_C63	AAA	AA00	72	0.18	AA00
055	7vnv_A_C63_A64	AAA	AA00	94	0.11	AA00
056	7vnv_A_A64_G65	AAA	AA00	96	0.09	AA00
057	7vnv_A_G65_C66	AAA	AA00	92	0.14	AA00
058	7vnv_A_C66_G67	AAA	AA00	89	0.13	AA00
059	7vnv_A_G67_G68	AAA	AA00	87	0.11	AA00
060	7vnv_A_G68_G69	AAA	AA08	83	0.15	AA08
061	7vnv_A_G69_C70	AAA	AA00	79	0.18	AA00
062	7vnv_A_C70_C71	AAA	AA00	95	0.08	AA00
063	7vnv_A_C71_C72	AAA	AA00	93	0.17	AA00
064	7vnv_A_C72_A73	AAA	AA00	85	0.15	AA00
065	7vnv_A_A73_C74	AAA	AA00	77	0.22	AA00
066	7vnv_A_C74_C75	AAA	AA00	71	0.26	AA00
067	7vnv_A_C75_A76	AAA	AA00	22	0.44	AA00
068	7vnv_B_G1_G2	AAA	AA00	90	0.13	AA00
069	7vnv_B_G2_G3	AAA	AA00	91	0.15	AA00
070	7vnv_B_G3_C4	AAA	AA00	82	0.08	AA00
071	7vnv_B_C4_C5	AAA	AA00	83	0.20	AA00
072	7vnv_B_G7_4SU8	OPN	OP11	95	0.23	OP11
073	7vnv_B_4SU8_C9	NAN	NANT	0	0.45	AA07
074	7vnv_B_C9_2MG10	NAN	NANT	0	1.42	OP26
075	7vnv_B_2MG10_U11	AAA	AA00	62	0.25	AA00
076	7vnv_B_U11_C12	AAA	AA00	91	0.17	AA00
077	7vnv_B_C16_OMC17	OPN	OP11	20	0.65	OP11
078	7vnv_B_OMC17_U17.A	ZZZ	ZZ01	97	0.17	ZZ01
079	7vnv_B_U17.A_G18	NAN	NANT	0	0.56	OP13
080	7vnv_B_G18_G19	NAN	NANT	0	0.44	IC06
081	7vnv_B_G19_U20	NAN	NANT	0	0.63	OP12
082	7vnv_B_U20.A_A21	NAN	NANT	0	0.95	OP04
083	7vnv_B_U20_U20.A	NAN	NANT	0	1.95	OP06
084	7vnv_B_A21_G22	AAu	AA07	91	0.14	AA07
085	7vnv_B_G22_G23	AAA	AA00	72	0.15	AA00
086	7vnv_B_G23_A24	AAA	AA00	78	0.11	AA00
087	7vnv_B_A24_C25	AAA	AA00	83	0.16	AA00
088	7vnv_B_C25_M2G26	AAA	AA00	81	0.24	AA00
089	7vnv_B_M2G26_C27	AAA	AA00	58	0.35	AA00
090	7vnv_B_C27_C28	AAA	AA08	73	0.18	AA08
091	7vnv_B_C28_G29	AAA	AA00	88	0.10	AA00
092	7vnv_B_G29_C30	AAA	AA00	96	0.08	AA00
093	7vnv_B_C30_C31	AAA	AA00	90	0.17	AA00
094	7vnv_B_C31_OMC32	AAA	AA00	74	0.30	AA00
095	7vnv_B_OMC32_U33	AAA	AA08	85	0.22	AA08
096	7vnv_B_U33_OMU34	OPN	OP03	25	0.43	OP03
097	7vnv_B_OMU34_A35	AAA	AA08	32	0.41	AA08
098	7vnv_B_A35_C36	AAw	AA11	86	0.29	AA11
099	7vnv_B_C36_A37	AAw	AA06	39	0.72	AA06
100	7vnv_B_A37_A38	AAA	AA08	54	0.32	AA08
101	7vnv_B_A38_G39	AAA	AA08	78	0.23	AA08
102	7vnv_B_G39_G40	AAA	AA00	74	0.14	AA00
103	7vnv_B_G40_C41	AAA	AA08	83	0.19	AA08
104	7vnv_B_C41_G42	AAA	AA08	78	0.18	AA08
105	7vnv_B_G42_G43	AAA	AA08	72	0.32	AA08
106	7vnv_B_G43_A44	AAA	AA00	64	0.23	AA00
107	7vnv_B_A44_G45	AAA	AA00	54	0.37	AA00
108	7vnv_B_G45_G46	NAN	NANT	0	0.84	AA08
109	7vnv_B_G46_9QV47	A-B	AB05	55	0.33	AB05
110	7vnv_B_9QV47_5MC48	OPN	OP22	65	0.46	OP22
111	7vnv_B_5MC48_5MC49	NAN	NANT	0	1.29	OP05
112	7vnv_B_5MC49_U50	AAA	AA00	75	0.17	AA00
113	7vnv_B_U50_G51	AAA	AA00	88	0.13	AA00
114	7vnv_B_G51_G52	AAA	AA00	80	0.13	AA00
115	7vnv_B_G52_G53	AAA	AA00	77	0.22	AA00
116	7vnv_B_G53_SUR54	AAA	AA00	91	0.18	AA00
117	7vnv_B_1MA58_G59	OPN	OP25	74	0.25	OP25
118	7vnv_B_G59_U60	A-B	AB05	68	0.37	AB05
119	7vnv_B_U60_C61	OPN	OP12	91	0.13	OP12
120	7vnv_B_C61_C62	AAA	AA00	80	0.19	AA00
121	7vnv_B_C62_C63	AAA	AA00	95	0.13	AA00
122	7vnv_B_C63_A64	AAA	AA00	93	0.10	AA00
123	7vnv_B_A64_G65	AAA	AA00	94	0.11	AA00
124	7vnv_B_G65_C66	AAA	AA00	78	0.15	AA00
125	7vnv_B_C66_G67	AAA	AA00	84	0.10	AA00
126	7vnv_B_G67_G68	AAA	AA00	88	0.14	AA00
127	7vnv_B_G68_G69	AAA	AA00	83	0.15	AA00
128	7vnv_B_G69_C70	AAA	AA00	87	0.07	AA00
129	7vnv_B_C70_C71	AAA	AA00	94	0.13	AA00
130	7vnv_B_C71_C72	AAA	AA00	76	0.16	AA00
131	7vnv_B_C72_A73	AAA	AA00	87	0.17	AA00
132	7vnv_B_A73_C74	AAA	AA00	77	0.30	AA00
133	7vnv_B_C74_C75	AAA	AA04	48	0.51	AA04
134	7vnv_B_C75_A76	NAN	NANT	0	1.02	OP1S

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 134 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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