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Conformers: ABBIImiBZICOPNSYNN
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Structure of GTP binds to Cyclic GMP AMP synthase (cGAS) through Mg coordination

Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
017uyq_E_DA1_DT2A-BAB01110.30 AB01
027uyq_E_DT2_DC3BBBBB00690.16 BB00
037uyq_E_DC3_DT4BBBBB00780.16 BB00
047uyq_E_DT4_DG5B12BB04510.44 BB04
057uyq_E_DG5_DT6BBBBB00840.19 BB00
067uyq_E_DT6_DA7BBBBB00810.17 BB00
077uyq_E_DA7_DC8BBBBB00740.30 BB00
087uyq_E_DC8_DA9BBBBB00790.26 BB00
097uyq_E_DA9_DT10BBBBB01910.14 BB01
107uyq_E_DT10_DG11BBBBB01880.18 BB01
117uyq_E_DG11_DT12BBBBB00350.23 BB00
127uyq_E_DT12_DA13BB2BB07630.30 BB07
137uyq_E_DA13_DC14BBBBB00910.13 BB00
147uyq_E_DC14_DA15BBBBB00820.24 BB00
157uyq_E_DA15_DG16B12BB04890.11 BB04
167uyq_E_DG16_DA17BBBBB00820.14 BB00
177uyq_E_DA17_DT18B-ABA05150.20 BA05
187uyq_F_DA1_DT2A-BAB01200.29 AB01
197uyq_F_DT2_DC3BBBBB00680.17 BB00
207uyq_F_DC3_DT4BBBBB00740.15 BB00
217uyq_F_DT4_DG5B12BB04710.28 BB04
227uyq_F_DG5_DT6BBBBB00920.17 BB00
237uyq_F_DT6_DA7BBBBB00920.13 BB00
247uyq_F_DA7_DC8BBBBB00850.21 BB00
257uyq_F_DC8_DA9B12BB04650.20 BB04
267uyq_F_DA9_DT10BBBBB01880.17 BB01
277uyq_F_DT10_DG11BBBBB01440.31 BB01
287uyq_F_DG11_DT12BBBBB00710.24 BB00
297uyq_F_DT12_DA13B12BB04640.21 BB04
307uyq_F_DA13_DC14BBBBB00890.14 BB00
317uyq_F_DC14_DA15NANNANT00.49 BB07
327uyq_F_DA15_DG16BBBBB00470.25 BB00
337uyq_F_DG16_DA17BBBBB00710.23 BB00
347uyq_F_DA17_DT18B-ABA05160.19 BA05
357uyq_I_DA1_DT2A-BAB01190.34 AB01
367uyq_I_DT2_DC3BBBBB00410.24 BB00
377uyq_I_DC3_DT4BBBBB00560.31 BB00
387uyq_I_DT4_DG5BBBBB00890.19 BB00
397uyq_I_DG5_DT6BBBBB00830.16 BB00
407uyq_I_DT6_DA7BBBBB01860.20 BB01
417uyq_I_DA7_DC8BBBBB00730.25 BB00
427uyq_I_DC8_DA9B12BB04710.23 BB04
437uyq_I_DA9_DT10BBBBB00660.19 BB00
447uyq_I_DT10_DG11B-ABA10370.37 BA10
457uyq_I_DG11_DT12NANNANT00.59 BB16
467uyq_I_DT12_DA13BBBBB00230.29 BB00
477uyq_I_DA13_DC14BBBBB00870.16 BB00
487uyq_I_DC14_DA15B12BB04240.15 BB04
497uyq_I_DA15_DG16B12BB04370.26 BB04
507uyq_I_DG16_DA17BBBBB00730.22 BB00
517uyq_I_DA17_DT18B-ABA05160.19 BA05
527uyq_J_DA1_DT2A-BAB03670.28 AB03
537uyq_J_DT2_DC3BBBBB00680.16 BB00
547uyq_J_DC3_DT4BBBBB00770.16 BB00
557uyq_J_DT4_DG5BBBBB00870.23 BB00
567uyq_J_DG5_DT6BBBBB00860.21 BB00
577uyq_J_DT6_DA7BBBBB00850.14 BB00
587uyq_J_DA7_DC8BBBBB00810.20 BB00
597uyq_J_DC8_DA9BBBBB00510.40 BB00
607uyq_J_DA9_DT10BBBBB00670.27 BB00
617uyq_J_DT10_DG11BBBBB01770.20 BB01
627uyq_J_DG11_DT12BBBBB00670.24 BB00
637uyq_J_DT12_DA13B12BB04690.19 BB04
647uyq_J_DA13_DC14BBBBB00900.14 BB00
657uyq_J_DC14_DA15B12BB04210.18 BB04
667uyq_J_DA15_DG16BBBBB00460.25 BB00
677uyq_J_DG16_DA17BBBBB00680.24 BB00
687uyq_J_DA17_DT18B-ABA05120.19 BA05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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