DNATCO v4.1: results

tRNA T-box antiterminator fusion, construct #4

Results of the assignment of 85 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	7uq6_B_GTP1_C2	NAN	NANT	0	0.55	AA03
02	7uq6_B_C2_G3	AAA	AA00	88	0.19	AA00
03	7uq6_B_G3_G4	AAA	AA00	95	0.11	AA00
04	7uq6_B_G4_A5	AAA	AA00	86	0.15	AA00
05	7uq6_B_A5_A6	AAA	AA00	92	0.16	AA00
06	7uq6_B_A6_G7	A-B	AB05	84	0.25	AB05
07	7uq6_B_G7_U8	OPN	OP11	58	0.38	OP11
08	7uq6_B_U8_A9	NAN	NANT	0	0.72	IC07
09	7uq6_B_A9_G10	NAN	NANT	0	1.05	OP12
10	7uq6_B_G10_U11	AAA	AA00	66	0.18	AA00
11	7uq6_B_U11_U12	AAA	AA00	82	0.18	AA00
12	7uq6_B_U12_C13	AAw	AA01	81	0.16	AA01
13	7uq6_B_C13_A14	AAw	AA10	44	0.41	AA10
14	7uq6_B_A14_G15	AAA	AA08	36	0.64	AA08
15	7uq6_B_G15_U16	NAN	NANT	0	0.77	OP06
16	7uq6_B_U16_G17	NAN	NANT	0	1.04	OP17
17	7uq6_B_G17_G18	NAN	NANT	0	0.38	IC05
18	7uq6_B_G18_U19	NAN	NANT	0	1.20	IC05
19	7uq6_B_U19_A20	NAN	NANT	0	0.62	OP17
20	7uq6_B_A20_G21	NAN	NANT	0	0.82	AA01
21	7uq6_B_G21_A22	NAN	NANT	0	0.33	AA06
22	7uq6_B_A22_A23	AAA	AA08	66	0.30	AA08
23	7uq6_B_A23_C24	AAA	AA08	90	0.15	AA08
24	7uq6_B_C24_A25	AAA	AA00	56	0.25	AA00
25	7uq6_B_A25_C26	AAA	AA00	42	0.30	AA00
26	7uq6_B_C26_C27	AAA	AA00	65	0.19	AA00
27	7uq6_B_C27_G28	AAA	AA00	86	0.14	AA00
28	7uq6_B_G28_G29	AAA	AA00	83	0.17	AA00
29	7uq6_B_G29_G30	AAA	AA00	97	0.14	AA00
30	7uq6_B_G30_U31	NAN	NANT	0	1.14	OP08
31	7uq6_B_U31_G32	NAN	NANT	0	0.93	OP05
32	7uq6_B_G32_G33	AAA	AA00	49	0.28	AA00
33	7uq6_B_G33_A34	AAA	AA00	70	0.26	AA00
34	7uq6_B_A34_A35	AAu	AA12	79	0.36	AA12
35	7uq6_B_A35_C36	AAA	AA08	32	0.53	AA08
36	7uq6_B_C36_C37	AAA	AA00	66	0.16	AA00
37	7uq6_B_C37_C38	AAA	AA00	36	0.33	AA00
38	7uq6_B_C38_C39	AAA	AA00	69	0.21	AA00
39	7uq6_B_C39_A40	AAA	AA00	65	0.22	AA00
40	7uq6_B_A40_G41	AAA	AA00	92	0.14	AA00
41	7uq6_B_G41_G42	AAA	AA08	88	0.22	AA08
42	7uq6_B_G42_A43	OPN	OP03	83	0.14	OP03
43	7uq6_B_A43_A44	AAA	AA00	24	0.35	AA00
44	7uq6_B_A44_A45	AAA	AA00	34	0.30	AA00
45	7uq6_B_A45_C46	NAN	NANT	0	0.87	AA08
46	7uq6_B_C46_U47	AAA	AA00	90	0.15	AA00
47	7uq6_B_U47_G48	AAA	AA00	79	0.17	AA00
48	7uq6_B_G48_G49	A-B	AB04	74	0.28	AB04
49	7uq6_B_G49_C50	OPN	OP12	81	0.21	OP12
50	7uq6_B_C50_C51	AAA	AA00	85	0.15	AA00
51	7uq6_B_C51_C52	AAA	AA00	82	0.17	AA00
52	7uq6_B_C52_G53	AAA	AA00	81	0.19	AA00
53	7uq6_B_G53_G54	AAA	AA00	78	0.20	AA00
54	7uq6_B_G54_G55	AAA	AA00	59	0.30	AA00
55	7uq6_B_G55_U56	AAA	AA00	43	0.35	AA00
56	7uq6_B_U56_C57	NAN	NANT	0	0.50	IC01
57	7uq6_B_C57_G58	NAN	NANT	0	0.68	OP14
58	7uq6_B_G58_C59	NAN	NANT	0	1.18	OP17
59	7uq6_B_C59_G60	NAN	NANT	0	0.66	OP21
60	7uq6_B_G60_C61	AAA	AA00	73	0.19	AA00
61	7uq6_B_C61_G62	AAA	AA00	79	0.16	AA00
62	7uq6_B_G62_G63	AAw	AA01	74	0.20	AA01
63	7uq6_B_G63_G64	AAA	AA08	59	0.21	AA08
64	7uq6_B_G64_U65	AAA	AA00	88	0.16	AA00
65	7uq6_B_U65_U66	AAA	AA08	72	0.29	AA08
66	7uq6_B_U66_C67	OPN	OP04	94	0.14	OP04
67	7uq6_B_C67_G68	AAA	AA00	76	0.28	AA00
68	7uq6_B_G68_A69	ICL	IC01	85	0.37	IC01
69	7uq6_B_A69_G70	NAN	NANT	0	0.56	OP25
70	7uq6_B_G70_U71	NAN	NANT	0	0.57	AAS1
71	7uq6_B_U71_C72	OPN	OP12	91	0.14	OP12
72	7uq6_B_C72_C73	AAA	AA00	64	0.24	AA00
73	7uq6_B_C73_C74	AAA	AA00	94	0.13	AA00
74	7uq6_B_C74_G75	AAA	AA00	90	0.10	AA00
75	7uq6_B_G75_U76	AAA	AA08	89	0.20	AA08
76	7uq6_B_U76_C77	AAA	AA00	88	0.16	AA00
77	7uq6_B_C77_U78	AAA	AA00	99	0.08	AA00
78	7uq6_B_U78_U79	AAA	AA00	97	0.11	AA00
79	7uq6_B_U79_C80	AAA	AA00	84	0.23	AA00
80	7uq6_B_C80_C81	AAA	AA00	90	0.17	AA00
81	7uq6_B_C81_G82	AAw	AA01	36	0.38	AA01
82	7uq6_B_G82_C83	AAA	AA08	88	0.21	AA08
83	7uq6_B_C83_U84	AAA	AA00	69	0.30	AA00
84	7uq6_B_U84_C85	AAu	AA12	96	0.15	AA12
85	7uq6_B_C85_C86	NAN	NANT	0	0.99	OP29

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 85 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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