Conformers:
ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
HIC2 zinc finger domain in complex with the DNA binding motif-2 of the BCL11A enhancer
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 30 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 7txc_A_DA1_DG2 | BBB | BB00 | 61 | 0.16 |
| 02 | 7txc_A_DG2_DA3 | BBB | BB00 | 92 | 0.19 |
| 03 | 7txc_A_DA3_DT4 | BBB | BB01 | 55 | 0.17 |
| 04 | 7txc_A_DT4_DA5 | BBB | BB00 | 29 | 0.29 |
| 05 | 7txc_A_DA5_DA6 | BBw | BB02 | 80 | 0.24 |
| 06 | 7txc_A_DA6_DT7 | BBB | BB00 | 47 | 0.28 |
| 07 | 7txc_A_DT7_DG8 | BBB | BB00 | 67 | 0.27 |
| 08 | 7txc_A_DG8_DC9 | BBw | BB02 | 58 | 0.31 |
| 09 | 7txc_A_DC9_DC10 | BBB | BB00 | 53 | 0.20 |
| 10 | 7txc_A_DC10_DA11 | B12 | BB04 | 78 | 0.20 |
| 11 | 7txc_A_DA11_DA12 | BBB | BB00 | 71 | 0.20 |
| 12 | 7txc_A_DA12_DC13 | BBB | BB00 | 74 | 0.23 |
| 13 | 7txc_A_DC13_DA14 | B12 | BB04 | 85 | 0.26 |
| 14 | 7txc_A_DA14_DG15 | B12 | BB04 | 32 | 0.34 |
| 15 | 7txc_A_DG15_DT16 | BBB | BB00 | 84 | 0.22 |
| 16 | 7txc_B_DA21_DC22 | BBB | BB00 | 72 | 0.20 |
| 17 | 7txc_B_DC22_DT23 | BBB | BB00 | 81 | 0.20 |
| 18 | 7txc_B_DT23_DG24 | B-A | BA08 | 78 | 0.24 |
| 19 | 7txc_B_DG24_DT25 | AAA | AA00 | 81 | 0.26 |
| 20 | 7txc_B_DT25_DT26 | AAA | AA00 | 48 | 0.31 |
| 21 | 7txc_B_DT26_DG27 | A-B | AB01 | 61 | 0.20 |
| 22 | 7txc_B_DG27_DG28 | BBB | BB00 | 85 | 0.19 |
| 23 | 7txc_B_DG28_DC29 | BBB | BB00 | 13 | 0.28 |
| 24 | 7txc_B_DC29_DA30 | B12 | BB04 | 75 | 0.17 |
| 25 | 7txc_B_DA30_DT31 | BBB | BB00 | 90 | 0.16 |
| 26 | 7txc_B_DT31_DT32 | BBB | BB00 | 71 | 0.24 |
| 27 | 7txc_B_DT32_DA33 | BBB | BB00 | 84 | 0.19 |
| 28 | 7txc_B_DA33_DT34 | BBB | BB00 | 73 | 0.19 |
| 29 | 7txc_B_DT34_DC35 | BBB | BB00 | 77 | 0.20 |
| 30 | 7txc_B_DC35_DT36 | NAN | NANT | 0 | 0.69 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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