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Conformers: ABBIImiBZICOPNSYNN
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Crystal structure of FBF-2 in complex with LST-1 site A peptide and compact FBE RNA

Results of the assignment of 7 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
17rzz_B_C1_U2NANNANT00.55 OP24
27rzz_B_U2_G3AAuAA12380.47 AA12
37rzz_B_G3_U4ICLIC07800.09 IC07
47rzz_B_U4_G5NANNANT00.75 AA01
57rzz_B_G5_A6NANNANT01.09 OP08
67rzz_B_A6_A7NANNANT01.21 AA11
77rzz_B_A7_U8ICLIC07570.25 IC07

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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