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Conformers: ABBIImiBZICOPNSYNN
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IRF4 Transcription factor mutant -K59R

Results of the assignment of 70 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
017rh2_C_DC1_DA2A-BAB01360.26 AB01
027rh2_C_DA2_DA3B-ABA05840.30 BA05
037rh2_C_DA3_DC4B-ABA05750.19 BA05
047rh2_C_DC4_DT5AAAAA02610.51 AA02
057rh2_C_DT5_DG6A-BAB01520.23 AB01
067rh2_C_DG6_DA7BBBBB00710.23 BB00
077rh2_C_DA7_DA8BBBBB00600.17 BB00
087rh2_C_DA8_DA9BBBBB00730.26 BB00
097rh2_C_DA9_DC10B-ABA05540.20 BA05
107rh2_C_DC10_DC11AAAAA00280.42 AA00
117rh2_C_DC11_DG12A-BAB01690.16 AB01
127rh2_C_DG12_DA13BBBBB00610.23 BB00
137rh2_C_DA13_DG14B12BB04570.15 BB04
147rh2_C_DG14_DA15B12BB04810.17 BB04
157rh2_C_DA15_DA16BBBBB01710.21 BB01
167rh2_C_DA16_DA17BBBBB01730.17 BB01
177rh2_C_DA17_DG18B-ABA05810.17 BA05
187rh2_C_DG18_DC19BBBBB01530.28 BB01
197rh2_D_DC1_DA2NANNANT00.96 BB20
207rh2_D_DA2_DA3BBBBB01740.26 BB01
217rh2_D_DA3_DC4B-ABA05810.21 BA05
227rh2_D_DC4_DT5AAAAA02600.54 AA02
237rh2_D_DT5_DG6A-BAB01470.23 AB01
247rh2_D_DG6_DA7BBBBB00630.23 BB00
257rh2_D_DA7_DA8BBBBB00490.22 BB00
267rh2_D_DA8_DA9BBBBB00700.29 BB00
277rh2_D_DA9_DC10B-ABA05510.21 BA05
287rh2_D_DC10_DC11AAAAA00330.41 AA00
297rh2_D_DC11_DG12A-BAB01710.15 AB01
307rh2_D_DG12_DA13BBBBB00630.23 BB00
317rh2_D_DA13_DG14B12BB04530.16 BB04
327rh2_D_DG14_DA15B12BB04810.17 BB04
337rh2_D_DA15_DA16BBBBB01700.20 BB01
347rh2_D_DA16_DA17BBBBB01700.19 BB01
357rh2_D_DA17_DG18B-ABA05940.18 BA05
367rh2_D_DG18_DC19BBBBB01580.32 BB01
377rh2_E_DC2_DT3BBBBB01100.32 BB01
387rh2_E_DT3_DT4miBBB13500.24 BB13
397rh2_E_DT4_DT5BBBBB00630.24 BB00
407rh2_E_DT5_DC6BBBBB00820.22 BB00
417rh2_E_DC6_DT7BBBBB00750.19 BB00
427rh2_E_DT7_DC8BBBBB01230.21 BB01
437rh2_E_DC8_DG9A-BAB03630.23 AB03
447rh2_E_DG9_DG10miBBB12710.25 BB12
457rh2_E_DG10_DT11BBwBB16460.64 BB16
467rh2_E_DT11_DT12BBBBB01830.15 BB01
477rh2_E_DT12_DT13BBBBB00480.27 BB00
487rh2_E_DT13_DC14BBBBB00930.14 BB00
497rh2_E_DC14_DA15B-ABA05330.38 BA05
507rh2_E_DA15_DG16NANNANT00.84 AB02
517rh2_E_DG16_DT17A-BAB04570.29 AB04
527rh2_E_DT17_DT18BBBBB00890.17 BB00
537rh2_E_DT18_DG19NANNANT00.53 ZZ2S
547rh2_F_DC2_DT3A-BAB01130.33 AB01
557rh2_F_DT3_DT4miBBB13230.32 BB13
567rh2_F_DT4_DT5BBBBB00640.25 BB00
577rh2_F_DT5_DC6BBBBB00830.23 BB00
587rh2_F_DC6_DT7BBBBB00800.18 BB00
597rh2_F_DT7_DC8BBBBB01140.23 BB01
607rh2_F_DC8_DG9A-BAB03660.22 AB03
617rh2_F_DG9_DG10miBBB12740.29 BB12
627rh2_F_DG10_DT11BBwBB16520.63 BB16
637rh2_F_DT11_DT12BBBBB01810.15 BB01
647rh2_F_DT12_DT13BBBBB00520.28 BB00
657rh2_F_DT13_DC14BBBBB00930.15 BB00
667rh2_F_DC14_DA15B-ABA05460.36 BA05
677rh2_F_DA15_DG16NANNANT00.20 BA09
687rh2_F_DG16_DT17A-BAB04510.33 AB04
697rh2_F_DT17_DT18BBBBB00740.24 BB00
707rh2_F_DT18_DG19BBBBB00680.23 BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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