DNATCO v4.1: results

Crystal structure of the methyltransferase-ribozyme 1 (1-benzyl-adenosine derivative)

Results of the assignment of 57 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	7q7y_A_C1_C2	AAA	AA00	47	0.35	AA00
02	7q7y_A_C2_A3	AAA	AA00	93	0.10	AA00
03	7q7y_A_A3_C4	AAA	AA08	95	0.17	AA08
04	7q7y_A_C4_U5	AAA	AA00	94	0.10	AA00
05	7q7y_A_U5_G6	AAA	AA00	86	0.17	AA00
06	7q7y_A_G8_A9	AAA	AA00	84	0.08	AA00
07	7q7y_A_A9_G10	AAA	AA00	79	0.14	AA00
08	7q7y_A_G10_U11	NAN	NANT	0	0.42	AA06
09	7q7y_A_U11_U12	AAA	AA08	34	0.38	AA08
10	7q7y_A_U12_U13	NAN	NANT	0	1.25	OP24
11	7q7y_A_U13_C14	NAN	NANT	0	0.70	BB12
12	7q7y_B_G1_G2	AAA	AA00	71	0.19	AA00
13	7q7y_B_G2_A3	AAA	AA00	77	0.13	AA00
14	7q7y_B_A3_A4	AAA	AA08	86	0.23	AA08
15	7q7y_B_A4_G5	AAA	AA08	86	0.25	AA08
16	7q7y_B_G5_C6	AAA	AA08	76	0.20	AA08
17	7q7y_B_C6_U7	AAA	AA00	81	0.19	AA00
18	7q7y_B_U7_C8	AAA	AA00	97	0.11	AA00
19	7q7y_B_C8_U9	AAA	AA00	95	0.12	AA00
20	7q7y_B_U9_G10	AAA	AA00	93	0.10	AA00
21	7q7y_B_G10_A11	NAN	NANT	0	1.44	OP05
22	7q7y_B_A11_C12	AAA	AA00	48	0.38	AA00
23	7q7y_B_C12_C13	AAA	AA00	67	0.26	AA00
24	7q7y_B_C13_G14	AAA	AA00	93	0.16	AA00
25	7q7y_B_G14_A15	OPN	OP02	31	0.33	OP02
26	7q7y_B_A15_C16	AAA	AA00	80	0.22	AA00
27	7q7y_B_C16_C17	AAA	AA08	79	0.39	AA08
28	7q7y_B_C17_C18	AAA	AA00	36	0.41	AA00
29	7q7y_B_C18_C19	AAA	AA00	85	0.16	AA00
30	7q7y_B_C19_C20	AAA	AA00	85	0.20	AA00
31	7q7y_B_C20_A21	AAA	AA00	96	0.10	AA00
32	7q7y_B_A21_G22	AAA	AA08	90	0.18	AA08
33	7q7y_B_G22_C23	AAA	AA00	92	0.19	AA00
34	7q7y_B_C23_C24	NAN	NANT	0	0.83	ZZ01
35	7q7y_C_G25_C26	AAA	AA00	72	0.15	AA00
36	7q7y_C_C26_U27	AAA	AA00	92	0.13	AA00
37	7q7y_C_U27_G28	AAA	AA00	85	0.14	AA00
38	7q7y_C_G28_G29	AAA	AA00	36	0.23	AA00
39	7q7y_C_G29_G30	AAA	AA00	69	0.15	AA00
40	7q7y_C_G30_A31	AAA	AA08	86	0.21	AA08
41	7q7y_C_A31_C32	AAA	AA00	67	0.35	AA00
42	7q7y_C_C32_A33	ZZZ	ZZ01	90	0.09	ZZ01
43	7q7y_C_A33_A34	NAN	NANT	0	2.11	OP19
44	7q7y_C_A34_C35	NAN	NANT	0	0.94	OP22
45	7q7y_C_C35_U36	NAN	NANT	0	1.61	OP17
46	7q7y_C_U36_A37	NAN	NANT	0	0.86	OP17
47	7q7y_C_A37_G38	NAN	NANT	0	1.16	ZZ1S
48	7q7y_C_G38_A39	NAN	NANT	0	1.33	OP30
49	7q7y_C_A39_C40	AAA	AA08	84	0.22	AA08
50	7q7y_C_C40_A41	AAA	AA00	80	0.30	AA00
51	7q7y_C_A41_U42	AAw	AA01	18	0.33	AA01
52	7q7y_C_U42_A43	AAA	AA08	9	0.44	AA08
53	7q7y_C_A43_C44	AAA	AA00	61	0.23	AA00
54	7q7y_C_C44_A45	AAA	AA00	80	0.11	AA00
55	7q7y_C_A45_G46	AAA	AA00	87	0.10	AA00
56	7q7y_C_G46_U47	AAA	AA00	75	0.07	AA00
57	7q7y_C_U47_G48	AAA	AA08	90	0.09	AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 57 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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