DNATCO v4.1: results

Target-bound SpCas9 complex with TRAC chimeric RNA-DNA guide

Results of the assignment of 116 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	7ox7_A_DA1_DG2	AAA	AA00	76	0.29	AA00
002	7ox7_A_DG2_DA3	AAA	AA00	56	0.27	AA00
003	7ox7_A_DA3_DG4	AAA	AA00	88	0.12	AA00
004	7ox7_A_DG4_DT5	AAA	AA00	88	0.19	AA00
005	7ox7_A_DT5_DC6	AAA	AA00	65	0.27	AA00
006	7ox7_A_DC6_DT7	NAN	NANT	0	0.61	AA03
007	7ox7_A_DT7_DC8	A-B	AB02	42	0.26	AB02
008	7ox7_A_DC8_DT9	B12	BB04	13	0.28	BB04
009	7ox7_A_DT9_DC10	A-B	AB03	71	0.36	AB03
010	7ox7_A_DC10_A11	B-A	BA08	62	0.33	BA08
011	7ox7_A_A11_G12	AAA	AA04	43	0.43	AA04
012	7ox7_A_G12_C13	AAA	AA00	71	0.16	AA00
013	7ox7_A_C13_U14	AAA	AA00	79	0.23	AA00
014	7ox7_A_U14_G15	AAA	AA00	79	0.16	AA00
015	7ox7_A_G15_G16	AAA	AA00	81	0.17	AA00
016	7ox7_A_G16_U17	AAw	AA10	53	0.18	AA10
017	7ox7_A_U17_A18	AAA	AA08	72	0.26	AA08
018	7ox7_A_A18_C19	AAA	AA08	81	0.14	AA08
019	7ox7_A_C19_A20	AAw	AA10	61	0.18	AA10
020	7ox7_A_A20_G21	AAA	AA00	46	0.39	AA00
021	7ox7_A_G21_U22	AAA	AA08	94	0.16	AA08
022	7ox7_A_U22_U23	AAA	AA08	94	0.18	AA08
023	7ox7_A_U23_U24	AAA	AA08	47	0.40	AA08
024	7ox7_A_U24_U25	AAA	AA00	73	0.15	AA00
025	7ox7_A_U25_A26	AAA	AA00	89	0.13	AA00
026	7ox7_A_A26_G27	AAA	AA00	58	0.17	AA00
027	7ox7_A_G27_A28	NAN	NANT	0	1.63	OP28
028	7ox7_A_A28_G29	NAN	NANT	0	1.75	OP14
029	7ox7_A_G29_C30	AAA	AA04	68	0.33	AA04
030	7ox7_A_C30_U31	AAA	AA00	97	0.11	AA00
031	7ox7_A_U31_A32	AAA	AA00	74	0.18	AA00
032	7ox7_A_A32_G33	NAN	NANT	0	0.87	BB2S
033	7ox7_A_G33_A34	NAN	NANT	0	0.78	OP04
034	7ox7_A_A34_A35	AAA	AA04	52	0.52	AA04
035	7ox7_A_A35_A36	NAN	NANT	0	0.36	AA03
036	7ox7_A_A36_U37	NAN	NANT	0	1.00	AA04
037	7ox7_A_U37_A38	AAA	AA03	73	0.24	AA03
038	7ox7_A_A38_G39	AAA	AA00	91	0.13	AA00
039	7ox7_A_G39_C40	AAA	AA04	80	0.17	AA04
040	7ox7_A_C40_A41	AAA	AA00	84	0.20	AA00
041	7ox7_A_A41_A42	AAA	AA00	76	0.34	AA00
042	7ox7_A_A42_G43	A-B	AB05	82	0.28	AB05
043	7ox7_A_G43_U44	NAN	NANT	0	0.67	OP20
044	7ox7_A_U44_U45	OPN	OP11	37	0.54	OP11
045	7ox7_A_U45_A46	AAA	AA00	64	0.21	AA00
046	7ox7_A_A46_A47	AAA	AA00	86	0.14	AA00
047	7ox7_A_A47_A48	AAA	AA08	85	0.21	AA08
048	7ox7_A_A48_A49	AAA	AA00	93	0.13	AA00
049	7ox7_A_A49_U50	AAA	AA08	81	0.16	AA08
050	7ox7_A_U50_A51	NAN	NANT	0	1.62	OP02
051	7ox7_A_A51_A52	NAN	NANT	0	0.90	OPS1
052	7ox7_A_A52_G53	NAN	NANT	0	0.62	AA05
053	7ox7_A_G53_G54	AAA	AA00	42	0.30	AA00
054	7ox7_A_G54_C55	A-B	AB05	77	0.29	AB05
055	7ox7_A_C55_U56	NAN	NANT	0	1.51	BB00
056	7ox7_A_U56_A57	NAN	NANT	0	0.55	IC06
057	7ox7_A_A57_G58	NAN	NANT	0	0.53	ZZ02
058	7ox7_A_G58_U59	NAN	NANT	0	0.97	OP17
059	7ox7_A_U59_C60	OPN	OP06	30	0.56	OP06
060	7ox7_A_C60_C61	AAA	AA00	93	0.14	AA00
061	7ox7_A_C61_G62	AAA	AA00	85	0.18	AA00
062	7ox7_A_G62_U63	NAN	NANT	0	0.85	IC02
063	7ox7_A_U63_U64	OPN	OP11	79	0.34	OP11
064	7ox7_A_U64_A65	AAA	AA00	43	0.43	AA00
065	7ox7_A_A65_U66	AAA	AA00	51	0.37	AA00
066	7ox7_A_U66_C67	AAA	AA00	33	0.45	AA00
067	7ox7_A_C67_A68	NAN	NANT	0	1.41	OP17
068	7ox7_A_A68_A69	AAA	AA00	58	0.36	AA00
069	7ox7_A_A69_C70	AAA	AA08	84	0.18	AA08
070	7ox7_A_C70_U71	AAA	AA00	62	0.14	AA00
071	7ox7_A_U71_U72	NAN	NANT	0	0.18	AA03
072	7ox7_A_U72_G73	AAA	AA00	38	0.37	AA00
073	7ox7_A_G73_A74	NAN	NANT	0	0.47	OP04
074	7ox7_A_A74_A75	NAN	NANT	0	0.61	AA10
075	7ox7_A_A75_A76	NAN	NANT	0	0.58	AA04
076	7ox7_A_A76_A77	NAN	NANT	0	0.61	AA10
077	7ox7_A_A77_A78	AAA	AA03	69	0.29	AA03
078	7ox7_A_A78_G79	AAA	AA00	38	0.24	AA00
079	7ox7_A_G79_U80	AAA	AA00	71	0.20	AA00
080	7ox7_A_U80_G81	NAN	NANT	0	0.62	AB05
081	7ox7_C_DC-7_DA-6	NAN	NANT	0	0.74	AA10
082	7ox7_C_DA-6_DA-5	BBw	BB16	85	0.30	BB16
083	7ox7_C_DA-5_DT-4	miB	BB15	56	0.31	BB15
084	7ox7_C_DT-4_DA-3	B-A	BA08	49	0.37	BA08
085	7ox7_C_DA-3_DC-2	BBB	BB01	62	0.26	BB01
086	7ox7_C_DC-2_DC-1	A-B	AB03	70	0.35	AB03
087	7ox7_C_DC-1_DG0	B12	BB04	45	0.31	BB04
088	7ox7_C_DG0_DT1	NAN	NANT	0	0.60	OP17
089	7ox7_C_DT1_DG2	NAN	NANT	0	0.40	AA04
090	7ox7_C_DG2_DT3	AAA	AA00	80	0.26	AA00
091	7ox7_C_DT3_DA4	AAA	AA00	96	0.19	AA00
092	7ox7_C_DA4_DC5	AAA	AA00	82	0.28	AA00
093	7ox7_C_DC5_DC6	AAA	AA00	95	0.22	AA00
094	7ox7_C_DC6_DA7	AAA	AA00	77	0.21	AA00
095	7ox7_C_DA7_DG8	AAw	AA10	77	0.19	AA10
096	7ox7_C_DG8_DC9	AAA	AA08	78	0.21	AA08
097	7ox7_C_DC9_DT10	AAA	AA00	80	0.26	AA00
098	7ox7_C_DT10_DG11	A-B	AB05	82	0.23	AB05
099	7ox7_C_DG11_DA12	BBB	BB00	79	0.26	BB00
100	7ox7_C_DA12_DG13	miB	BB10	15	0.26	BB10
101	7ox7_C_DG13_DA14	NAN	NANT	0	0.49	BB15
102	7ox7_C_DA14_DG15	NAN	NANT	0	0.47	BB04
103	7ox7_C_DG15_DA16	B-A	BA08	68	0.34	BA08
104	7ox7_C_DA16_DC17	AAw	AA01	27	0.43	AA01
105	7ox7_C_DC17_DT18	AAA	AA08	61	0.26	AA08
106	7ox7_C_DT18_DC19	AAw	AA10	74	0.22	AA10
107	7ox7_C_DC19_DT20	AAA	AA04	55	0.40	AA04
108	7ox7_D_DC-2_DA-1	BBB	BB00	18	0.47	BB00
109	7ox7_D_DA-1_DC0	B12	BB04	43	0.37	BB04
110	7ox7_D_DC0_DG1	BB2	BB07	43	0.23	BB07
111	7ox7_D_DG1_DG2	BBB	BB00	68	0.34	BB00
112	7ox7_D_DG2_DT3	B-A	BA05	78	0.13	BA05
113	7ox7_D_DT3_DA4	A-B	AB03	64	0.23	AB03
114	7ox7_D_DA4_DT5	BBB	BB00	91	0.19	BB00
115	7ox7_D_DT5_DT6	BBB	BB00	92	0.18	BB00
116	7ox7_D_DT6_DG7	miB	BB15	81	0.31	BB15

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 116 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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