Conformers:
ABBIImiBZICOPNSYNN
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ZBTB7A Zinc Finger Domain Bound to -200 Site of Fetal Globin Promoter (Oligo 5)
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 27 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 7n5t_X_DG2_DT3 | BBB | BB00 | 58 | 0.29 |
| 02 | 7n5t_X_DT3_DG4 | BBw | BB02 | 58 | 0.31 |
| 03 | 7n5t_X_DG4_DG5 | BBB | BB00 | 42 | 0.30 |
| 04 | 7n5t_X_DG5_DG6 | B12 | BB04 | 62 | 0.19 |
| 05 | 7n5t_X_DG6_DG7 | BBB | BB01 | 45 | 0.22 |
| 06 | 7n5t_X_DG7_DA8 | BBB | BB00 | 12 | 0.28 |
| 07 | 7n5t_X_DA8_DA9 | BBB | BB00 | 90 | 0.16 |
| 08 | 7n5t_X_DA9_DG10 | B12 | BB05 | 58 | 0.32 |
| 09 | 7n5t_X_DG10_DG11 | BBw | BB16 | 34 | 0.52 |
| 10 | 7n5t_X_DG11_DG12 | BBB | BB01 | 56 | 0.16 |
| 11 | 7n5t_X_DG12_DG13 | B12 | BB04 | 53 | 0.27 |
| 12 | 7n5t_X_DG13_DC14 | BBB | BB00 | 89 | 0.18 |
| 13 | 7n5t_X_DC14_DC15 | BBB | BB00 | 75 | 0.16 |
| 14 | 7n5t_Y_DA1_DG2 | BBB | BB01 | 26 | 0.35 |
| 15 | 7n5t_Y_DG2_DG3 | BBB | BB00 | 56 | 0.41 |
| 16 | 7n5t_Y_DG3_DC4 | BBB | BB00 | 75 | 0.25 |
| 17 | 7n5t_Y_DC4_DC5 | B-A | BA01 | 32 | 0.22 |
| 18 | 7n5t_Y_DC5_DC6 | AAA | AA00 | 61 | 0.33 |
| 19 | 7n5t_Y_DC6_DC7 | AAA | AA00 | 73 | 0.26 |
| 20 | 7n5t_Y_DC7_DT8 | AAA | AA00 | 87 | 0.22 |
| 21 | 7n5t_Y_DT8_DT9 | A-B | AB05 | 26 | 0.18 |
| 22 | 7n5t_Y_DT9_DC10 | BBB | BB00 | 85 | 0.15 |
| 23 | 7n5t_Y_DC10_DC11 | BBw | BB02 | 23 | 0.42 |
| 24 | 7n5t_Y_DC11_DC12 | BBB | BB00 | 50 | 0.33 |
| 25 | 7n5t_Y_DC12_DC13 | B-A | BA08 | 52 | 0.34 |
| 26 | 7n5t_Y_DC13_DA14 | A-B | AB05 | 78 | 0.37 |
| 27 | 7n5t_Y_DA14_DC15 | NAN | NANT | 0 | 0.33 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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