DNATCO v4.1: results

Structure of HIV-1 matrix domain bound to human tRNALys3

Results of the assignment of 74 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	7mrl_A_A1_C2	AAA	AA00	90	0.11	AA00
02	7mrl_A_C2_C3	AAA	AA00	86	0.15	AA00
03	7mrl_A_C3_C4	AAA	AA00	80	0.14	AA00
04	7mrl_A_C4_G5	AAA	AA00	67	0.16	AA00
05	7mrl_A_G5_G6	AAw	AA01	80	0.23	AA01
06	7mrl_A_G6_A7	A-B	AB05	52	0.29	AB05
07	7mrl_A_A7_U8	OPN	OP11	74	0.36	OP11
08	7mrl_A_U8_A9	NAN	NANT	0	0.91	IC02
09	7mrl_A_A9_G10	NAN	NANT	0	1.25	OP26
10	7mrl_A_G10_C11	AAA	AA08	31	0.30	AA08
11	7mrl_A_C11_U12	AAA	AA00	87	0.18	AA00
12	7mrl_A_U12_C13	AAw	AA01	64	0.28	AA01
13	7mrl_A_C13_A14	AAw	AA01	52	0.39	AA01
14	7mrl_A_A14_G15	AAA	AA08	67	0.43	AA08
15	7mrl_A_G15_U16	NAN	NANT	0	0.51	OP28
16	7mrl_A_U16_C17	NAN	NANT	0	1.21	IC03
17	7mrl_A_C17_G18	NAN	NANT	0	1.45	OP17
18	7mrl_A_G18_G19	ICL	IC06	75	0.23	IC06
19	7mrl_A_G19_U20	NAN	NANT	0	1.78	OP31
20	7mrl_A_U20_A21	NAN	NANT	0	1.23	IC07
21	7mrl_A_A21_G22	NAN	NANT	0	0.91	AA11
22	7mrl_A_G22_A23	AAA	AA00	72	0.22	AA00
23	7mrl_A_A23_G24	AAA	AA00	94	0.07	AA00
24	7mrl_A_G24_C25	AAA	AA08	81	0.11	AA08
25	7mrl_A_C25_A26	AAA	AA00	78	0.31	AA00
26	7mrl_A_A26_U27	AAA	AA00	80	0.21	AA00
27	7mrl_A_U27_C28	AAA	AA00	84	0.18	AA00
28	7mrl_A_C28_A29	AAA	AA00	97	0.11	AA00
29	7mrl_A_A29_G30	AAA	AA00	77	0.21	AA00
30	7mrl_A_G30_A31	AAA	AA00	91	0.14	AA00
31	7mrl_A_A31_C32	AAA	AA00	96	0.10	AA00
32	7mrl_A_C32_A33	AAA	AA00	75	0.20	AA00
33	7mrl_A_A33_G34	AAA	AA00	92	0.10	AA00
34	7mrl_A_G34_G35	AAA	AA00	76	0.23	AA00
35	7mrl_A_G35_A36	NAN	NANT	0	2.22	IC03
36	7mrl_A_A36_A37	SYN	AAS1	55	0.34	AAS1
37	7mrl_A_A37_A38	AAA	AA00	45	0.29	AA00
38	7mrl_A_A38_C39	NAN	NANT	0	1.01	AA04
39	7mrl_A_C39_U40	AAA	AA00	81	0.18	AA00
40	7mrl_A_U40_G41	AAw	AA01	80	0.29	AA01
41	7mrl_A_G41_U42	NAN	NANT	0	0.64	AB02
42	7mrl_A_U42_C43	AAA	AA00	61	0.21	AA00
43	7mrl_A_C43_U44	AAA	AA00	89	0.17	AA00
44	7mrl_A_U44_G45	AAA	AA00	91	0.18	AA00
45	7mrl_A_G45_A46	AAA	AA00	93	0.14	AA00
46	7mrl_A_A46_G47	AAA	AA00	74	0.15	AA00
47	7mrl_A_G47_G48	AAA	AA08	66	0.39	AA08
48	7mrl_A_G48_G49	NAN	NANT	0	0.45	IC03
49	7mrl_A_G49_U50	NAN	NANT	0	0.77	BB13
50	7mrl_A_U50_C51	NAN	NANT	0	1.23	BB17
51	7mrl_A_C51_C52	NAN	NANT	0	1.27	OP05
52	7mrl_A_C52_A53	AAA	AA00	81	0.25	AA00
53	7mrl_A_A53_G54	AAA	AA00	53	0.25	AA00
54	7mrl_A_G54_G55	AAw	AA01	65	0.27	AA01
55	7mrl_A_G55_G56	AAA	AA08	73	0.23	AA08
56	7mrl_A_G56_U57	AAA	AA00	72	0.23	AA00
57	7mrl_A_U57_U58	AAA	AA00	64	0.35	AA00
58	7mrl_A_U58_C59	OPN	OP04	65	0.14	OP04
59	7mrl_A_C59_A60	AAA	AA00	62	0.35	AA00
60	7mrl_A_A60_A61	ICL	IC01	80	0.36	IC01
61	7mrl_A_A61_G62	NAN	NANT	0	0.28	OP25
62	7mrl_A_G62_U63	A-B	AB05	70	0.44	AB05
63	7mrl_A_U63_C64	OPN	OP12	94	0.12	OP12
64	7mrl_A_C64_C65	AAA	AA00	54	0.29	AA00
65	7mrl_A_C65_C66	AAA	AA00	75	0.15	AA00
66	7mrl_A_C66_U67	AAA	AA00	90	0.16	AA00
67	7mrl_A_U67_G68	AAA	AA00	93	0.12	AA00
68	7mrl_A_G68_U69	AAA	AA00	93	0.17	AA00
69	7mrl_A_U69_U70	AAA	AA00	81	0.29	AA00
70	7mrl_A_U70_C71	AAA	AA00	76	0.24	AA00
71	7mrl_A_C71_G72	AAA	AA00	88	0.14	AA00
72	7mrl_A_G72_G73	AAA	AA00	92	0.10	AA00
73	7mrl_A_G73_G74	AAA	AA00	92	0.13	AA00
74	7mrl_A_G74_U75	AAA	AA00	93	0.13	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 74 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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