DNATCO v4.1: results

Ternary complex of TERT (telomerase reverse transcriptase) with RNA template, DNA primer, an incoming dGTP and a downstream hybrid duplex

Results of the assignment of 58 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	7kqn_B_C1_A2	AAA	AA00	87	0.13	AA00
02	7kqn_B_A2_A3	AAA	AA08	88	0.17	AA08
03	7kqn_B_A3_A4	AAA	AA00	90	0.11	AA00
04	7kqn_B_A4_G5	AAA	AA08	85	0.17	AA08
05	7kqn_B_G5_A6	AAA	AA00	92	0.15	AA00
06	7kqn_B_A6_A7	AAA	AA00	85	0.10	AA00
07	7kqn_B_A7_A8	NAN	NANT	0	0.47	OP01
08	7kqn_B_A8_U9	NAN	NANT	0	1.23	OP13
09	7kqn_B_U9_C10	NAN	NANT	0	0.50	OP15
10	7kqn_B_C10_C11	AAA	AA00	79	0.26	AA00
11	7kqn_B_C11_A12	AAA	AA00	75	0.17	AA00
12	7kqn_B_A12_G13	AAA	AA00	67	0.20	AA00
13	7kqn_B_G13_G14	AAA	AA00	87	0.20	AA00
14	7kqn_B_G14_U15	AAA	AA00	87	0.12	AA00
15	7kqn_B_U15_G16	NAN	NANT	0	0.77	AA10
16	7kqn_B_G16_C17	AAA	AA00	80	0.22	AA00
17	7kqn_B_C17_A18	AAA	AA08	67	0.34	AA08
18	7kqn_C_DG1_DC2	AAA	AA00	55	0.26	AA00
19	7kqn_C_DC2_DA3	A-B	AB05	12	0.31	AB05
20	7kqn_C_DA3_DC4	B-A	BA13	91	0.14	BA13
21	7kqn_C_DC4_DC5	AAA	AA00	86	0.19	AA00
22	7kqn_C_DC5_DT6	AAA	AA00	78	0.24	AA00
23	7kqn_C_DT6_DG7	AAA	AA00	82	0.23	AA00
24	7kqn_E_C1_A2	AAA	AA00	85	0.17	AA00
25	7kqn_E_A2_A3	AAA	AA00	73	0.17	AA00
26	7kqn_E_A3_A4	AAA	AA00	90	0.13	AA00
27	7kqn_E_A4_G5	AAA	AA00	72	0.17	AA00
28	7kqn_E_G5_A6	AAA	AA00	92	0.16	AA00
29	7kqn_E_A6_A7	AAA	AA00	84	0.09	AA00
30	7kqn_E_A7_A8	NAN	NANT	0	0.51	OP01
31	7kqn_E_A8_U9	NAN	NANT	0	1.25	OP13
32	7kqn_E_U9_C10	NAN	NANT	0	0.53	OP15
33	7kqn_E_C10_C11	AAA	AA00	80	0.25	AA00
34	7kqn_E_C11_A12	AAA	AA00	74	0.16	AA00
35	7kqn_E_A12_G13	AAA	AA00	75	0.17	AA00
36	7kqn_E_G13_G14	AAA	AA00	86	0.20	AA00
37	7kqn_E_G14_U15	AAA	AA00	90	0.12	AA00
38	7kqn_E_U15_G16	NAN	NANT	0	0.77	AA10
39	7kqn_E_G16_C17	AAA	AA00	82	0.18	AA00
40	7kqn_E_C17_A18	AAA	AA08	65	0.31	AA08
41	7kqn_F_DG1_DC2	AAA	AA00	53	0.30	AA00
42	7kqn_F_DC2_DA3	A-B	AB01	26	0.48	AB01
43	7kqn_F_DA3_DC4	B-A	BA13	91	0.14	BA13
44	7kqn_F_DC4_DC5	AAA	AA00	87	0.22	AA00
45	7kqn_F_DC5_DT6	AAA	AA00	86	0.21	AA00
46	7kqn_F_DT6_DG7	AAA	AA00	82	0.20	AA00
47	7kqn_I_DT1_DT2	NAN	NANT	0	0.41	BB13
48	7kqn_I_DT2_DC3	AAA	AA00	58	0.41	AA00
49	7kqn_I_DC3_DT4	NAN	NANT	0	0.38	AA01
50	7kqn_I_DT4_DT5	A-B	AB03	40	0.41	AB03
51	7kqn_I_DT5_DT6	NAN	NANT	0	0.47	AA04
52	7kqn_I_DT6_DG7	NAN	NANT	0	0.41	BB13
53	7kqn_J_DT1_DT2	NAN	NANT	0	0.40	BB13
54	7kqn_J_DT2_DC3	AAA	AA00	69	0.40	AA00
55	7kqn_J_DC3_DT4	NAN	NANT	0	0.39	AA01
56	7kqn_J_DT4_DT5	A-B	AB03	40	0.40	AB03
57	7kqn_J_DT5_DT6	NAN	NANT	0	0.44	AA04
58	7kqn_J_DT6_DG7	NAN	NANT	0	0.44	BB13

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 58 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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