Conformers:
ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Binary complex of TERT (telomerase reverse transcriptase) with RNA/telomeric DNA hybrid
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 30 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 7kqm_B_U2_C3 | NAN | NANT | 0 | 0.90 |
| 02 | 7kqm_B_C3_C4 | AAA | AA00 | 81 | 0.17 |
| 03 | 7kqm_B_C4_A5 | AAA | AA08 | 80 | 0.34 |
| 04 | 7kqm_B_A5_G6 | AAA | AA04 | 80 | 0.21 |
| 05 | 7kqm_B_G6_G7 | AAA | AA08 | 69 | 0.24 |
| 06 | 7kqm_B_G7_U8 | AAA | AA08 | 73 | 0.22 |
| 07 | 7kqm_B_U8_G9 | NAN | NANT | 0 | 0.45 |
| 08 | 7kqm_B_G9_C10 | AAA | AA08 | 78 | 0.19 |
| 09 | 7kqm_B_C10_A11 | AAA | AA04 | 88 | 0.16 |
| 10 | 7kqm_B_A11_C12 | AAA | AA08 | 97 | 0.14 |
| 11 | 7kqm_B_C12_DA13 | NAN | NANT | 0 | 0.51 |
| 12 | 7kqm_B_DA13_DA14 | NAN | NANT | 0 | 0.37 |
| 13 | 7kqm_B_DA14_DA15 | BBB | BB00 | 74 | 0.14 |
| 14 | 7kqm_B_DA15_DG16 | miB | BB10 | 79 | 0.15 |
| 15 | 7kqm_B_DG16_DA17 | NAN | NANT | 0 | 0.59 |
| 16 | 7kqm_B_DA17_DA18 | A-B | AB05 | 19 | 0.27 |
| 17 | 7kqm_C_DT1_DT2 | BBB | BB00 | 74 | 0.24 |
| 18 | 7kqm_C_DT2_DC3 | BBB | BB00 | 70 | 0.21 |
| 19 | 7kqm_C_DC3_DT4 | BBB | BB00 | 28 | 0.17 |
| 20 | 7kqm_C_DT4_DT5 | NAN | NANT | 0 | 0.50 |
| 21 | 7kqm_C_DT5_DT6 | AAA | AA08 | 34 | 0.25 |
| 22 | 7kqm_C_DT6_DG7 | NAN | NANT | 0 | 0.37 |
| 23 | 7kqm_C_DG7_DT8 | AAA | AA08 | 83 | 0.22 |
| 24 | 7kqm_C_DT8_DG9 | AAA | AA08 | 84 | 0.19 |
| 25 | 7kqm_C_DG9_DC10 | A-B | AB02 | 44 | 0.42 |
| 26 | 7kqm_C_DC10_DA11 | B12 | BB04 | 33 | 0.34 |
| 27 | 7kqm_C_DA11_DC12 | B-A | BA10 | 89 | 0.21 |
| 28 | 7kqm_C_DC12_DC13 | AAA | AA04 | 79 | 0.21 |
| 29 | 7kqm_C_DC13_DT14 | AAA | AA03 | 63 | 0.23 |
| 30 | 7kqm_C_DT14_DG15 | AAw | AA06 | 70 | 0.32 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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