DNATCO v4.1: results

Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (crystal form I)

Results of the assignment of 59 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	7k9d_B_GTP484_G485	AAA	AA00	72	0.18	AA00
02	7k9d_B_G485_C486	AAA	AA00	83	0.14	AA00
03	7k9d_B_C486_C487	AAA	AA00	88	0.21	AA00
04	7k9d_B_C487_A488	AAA	AA00	88	0.13	AA00
05	7k9d_B_A488_G489	AAA	AA00	60	0.24	AA00
06	7k9d_B_G489_U490	AAA	AA00	83	0.20	AA00
07	7k9d_B_U490_C491	A-B	AB05	76	0.30	AB05
08	7k9d_B_C491_U492	NAN	NANT	0	1.39	OP13
09	7k9d_B_U492_G493	AAA	AA00	67	0.19	AA00
10	7k9d_B_G493_G494	AAA	AA00	83	0.16	AA00
11	7k9d_B_G494_C495	AAA	AA00	88	0.14	AA00
12	7k9d_B_C495_G496	AAA	AA00	93	0.16	AA00
13	7k9d_B_G496_U497	AAA	AA00	79	0.17	AA00
14	7k9d_B_U497_U498	NAN	NANT	0	1.42	OP29
15	7k9d_B_U498_U499	OPN	OP11	73	0.30	OP11
16	7k9d_B_U499_G500	AAA	AA00	55	0.25	AA00
17	7k9d_B_G500_G501	AAA	AA00	92	0.16	AA00
18	7k9d_B_G501_U502	OPN	OP03	87	0.29	OP03
19	7k9d_B_U502_G503	AAA	AA08	54	0.44	AA08
20	7k9d_B_G503_A504	AAA	AA09	78	0.27	AA09
21	7k9d_B_A504_C505	AAw	AA05	40	0.41	AA05
22	7k9d_B_C505_A506	AAA	AA08	90	0.24	AA08
23	7k9d_B_A506_G507	AAA	AA00	89	0.14	AA00
24	7k9d_B_G507_C508	AAA	AA00	83	0.20	AA00
25	7k9d_B_C508_G509	AAA	AA00	69	0.22	AA00
26	7k9d_B_G509_C510	AAA	AA00	93	0.11	AA00
27	7k9d_B_C510_C511	AAA	AA00	88	0.16	AA00
28	7k9d_B_C511_A512	AAw	AA01	88	0.12	AA01
29	7k9d_B_A512_A513	AAA	AA00	57	0.24	AA00
30	7k9d_B_A513_G514	AAA	AA00	85	0.16	AA00
31	7k9d_B_G514_U515	AAA	AA00	91	0.12	AA00
32	7k9d_B_U515_U516	AAA	AA00	80	0.10	AA00
33	7k9d_B_U516_C517	AAA	AA00	88	0.13	AA00
34	7k9d_B_C517_U518	AAA	AA00	92	0.21	AA00
35	7k9d_B_U518_U519	OPN	OP09	82	0.20	OP09
36	7k9d_B_U519_C520	OPN	OP20	64	0.47	OP20
37	7k9d_B_C520_G521	ZZZ	ZZ1S	38	0.32	ZZ1S
38	7k9d_B_G521_G522	NAN	NANT	0	0.49	AA05
39	7k9d_B_G522_A523	AAA	AA00	74	0.15	AA00
40	7k9d_B_A523_A524	AAA	AA00	82	0.08	AA00
41	7k9d_B_A524_U525	AAA	AA00	75	0.26	AA00
42	7k9d_B_U525_U526	A-B	AB05	77	0.29	AB05
43	7k9d_B_U526_G527	NAN	NANT	0	1.10	OP13
44	7k9d_B_G527_G528	AAA	AA08	47	0.25	AA08
45	7k9d_B_G528_G529	AAA	AA00	78	0.26	AA00
46	7k9d_B_G529_A530	OPN	OP04	44	0.18	OP04
47	7k9d_B_A530_A531	AAA	AA08	75	0.28	AA08
48	7k9d_B_A531_A532	AAA	AA00	54	0.28	AA00
49	7k9d_B_A532_U533	NAN	NANT	0	1.61	OP28
50	7k9d_B_U533_C534	OPN	OP11	39	0.59	OP11
51	7k9d_B_C534_C535	AAA	AA00	85	0.13	AA00
52	7k9d_B_C535_U536	AAu	AA12	78	0.27	AA12
53	7k9d_B_U536_A537	AAA	AA00	85	0.25	AA00
54	7k9d_B_A537_C538	AAA	AA00	86	0.16	AA00
55	7k9d_B_C538_U539	AAA	AA00	84	0.20	AA00
56	7k9d_B_U539_G540	AAA	AA00	86	0.13	AA00
57	7k9d_B_G540_G541	AAA	AA00	85	0.16	AA00
58	7k9d_B_G541_C542	AAA	AA00	88	0.15	AA00
59	7k9d_B_C542_C543	AAA	AA00	83	0.27	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 59 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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