Conformers:
ABBIImiBZICOPNSYNN
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DENV1 SLA bottom stem RNA (DenvBS)
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 350 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 001 | 7k4l-m10_A_G1_G2 | A-B | AB05 | 94 | 0.18 |
| 002 | 7k4l-m1_A_G1_G2 | OPN | OP12 | 67 | 0.52 |
| 003 | 7k4l-m2_A_G1_G2 | A-B | AB05 | 97 | 0.15 |
| 004 | 7k4l-m3_A_G1_G2 | OPN | OP12 | 62 | 0.51 |
| 005 | 7k4l-m4_A_G1_G2 | NAN | NANT | 0 | 1.56 |
| 006 | 7k4l-m5_A_G1_G2 | NAN | NANT | 0 | 1.62 |
| 007 | 7k4l-m6_A_G1_G2 | AAA | AA00 | 94 | 0.18 |
| 008 | 7k4l-m7_A_G1_G2 | AAA | AA00 | 93 | 0.19 |
| 009 | 7k4l-m8_A_G1_G2 | AAw | AA01 | 82 | 0.26 |
| 010 | 7k4l-m9_A_G1_G2 | OPN | OP08 | 9 | 0.33 |
| 011 | 7k4l-m10_A_G2_A3 | OPN | OP20 | 55 | 0.56 |
| 012 | 7k4l-m1_A_G2_A3 | AAw | AA01 | 85 | 0.23 |
| 013 | 7k4l-m2_A_G2_A3 | NAN | NANT | 0 | 0.70 |
| 014 | 7k4l-m3_A_G2_A3 | AAw | AA01 | 81 | 0.30 |
| 015 | 7k4l-m4_A_G2_A3 | NAN | NANT | 0 | 1.49 |
| 016 | 7k4l-m5_A_G2_A3 | AAw | AA01 | 79 | 0.26 |
| 017 | 7k4l-m6_A_G2_A3 | NAN | NANT | 0 | 0.70 |
| 018 | 7k4l-m7_A_G2_A3 | NAN | NANT | 0 | 0.19 |
| 019 | 7k4l-m8_A_G2_A3 | AAw | AA01 | 86 | 0.25 |
| 020 | 7k4l-m9_A_G2_A3 | AAw | AA01 | 81 | 0.29 |
| 021 | 7k4l-m10_A_A3_G4 | NAN | NANT | 0 | 1.13 |
| 022 | 7k4l-m1_A_A3_G4 | AAA | AA00 | 96 | 0.10 |
| 023 | 7k4l-m2_A_A3_G4 | A-B | AB05 | 93 | 0.28 |
| 024 | 7k4l-m3_A_A3_G4 | A-B | AB05 | 96 | 0.22 |
| 025 | 7k4l-m4_A_A3_G4 | AAw | AA01 | 80 | 0.25 |
| 026 | 7k4l-m5_A_A3_G4 | AAw | AA01 | 87 | 0.26 |
| 027 | 7k4l-m6_A_A3_G4 | NAN | NANT | 0 | 0.90 |
| 028 | 7k4l-m7_A_A3_G4 | NAN | NANT | 0 | 0.95 |
| 029 | 7k4l-m8_A_A3_G4 | AAA | AA00 | 96 | 0.11 |
| 030 | 7k4l-m9_A_A3_G4 | AAw | AA01 | 91 | 0.16 |
| 031 | 7k4l-m10_A_G4_U5 | AAw | AA01 | 87 | 0.27 |
| 032 | 7k4l-m1_A_G4_U5 | NAN | NANT | 0 | 0.69 |
| 033 | 7k4l-m2_A_G4_U5 | NAN | NANT | 0 | 1.55 |
| 034 | 7k4l-m3_A_G4_U5 | NAN | NANT | 0 | 2.12 |
| 035 | 7k4l-m4_A_G4_U5 | NAN | NANT | 0 | 1.09 |
| 036 | 7k4l-m5_A_G4_U5 | AAA | AA00 | 90 | 0.14 |
| 037 | 7k4l-m6_A_G4_U5 | AAA | AA00 | 97 | 0.10 |
| 038 | 7k4l-m7_A_G4_U5 | AAw | AA01 | 84 | 0.25 |
| 039 | 7k4l-m8_A_G4_U5 | AAA | AA00 | 96 | 0.13 |
| 040 | 7k4l-m9_A_G4_U5 | A-B | AB05 | 71 | 0.31 |
| 041 | 7k4l-m10_A_U5_G6 | AAA | AA00 | 89 | 0.23 |
| 042 | 7k4l-m1_A_U5_G6 | AAA | AA00 | 95 | 0.15 |
| 043 | 7k4l-m2_A_U5_G6 | NAN | NANT | 0 | 0.51 |
| 044 | 7k4l-m3_A_U5_G6 | OPN | OP12 | 66 | 0.53 |
| 045 | 7k4l-m4_A_U5_G6 | NAN | NANT | 0 | 0.62 |
| 046 | 7k4l-m5_A_U5_G6 | AAA | AA00 | 95 | 0.18 |
| 047 | 7k4l-m6_A_U5_G6 | NAN | NANT | 0 | 0.71 |
| 048 | 7k4l-m7_A_U5_G6 | NAN | NANT | 0 | 0.86 |
| 049 | 7k4l-m8_A_U5_G6 | NAN | NANT | 0 | 0.82 |
| 050 | 7k4l-m9_A_U5_G6 | OPN | OP16 | 33 | 0.44 |
| 051 | 7k4l-m10_A_G6_G7 | AAA | AA00 | 96 | 0.09 |
| 052 | 7k4l-m1_A_G6_G7 | AAA | AA00 | 96 | 0.10 |
| 053 | 7k4l-m2_A_G6_G7 | AAA | AA00 | 96 | 0.11 |
| 054 | 7k4l-m3_A_G6_G7 | AAA | AA00 | 96 | 0.10 |
| 055 | 7k4l-m4_A_G6_G7 | AAA | AA00 | 96 | 0.12 |
| 056 | 7k4l-m5_A_G6_G7 | AAA | AA00 | 96 | 0.10 |
| 057 | 7k4l-m6_A_G6_G7 | AAA | AA00 | 96 | 0.10 |
| 058 | 7k4l-m7_A_G6_G7 | AAA | AA00 | 96 | 0.13 |
| 059 | 7k4l-m8_A_G6_G7 | AAA | AA00 | 95 | 0.12 |
| 060 | 7k4l-m9_A_G6_G7 | AAA | AA00 | 95 | 0.11 |
| 061 | 7k4l-m10_A_G7_U8 | AAA | AA00 | 97 | 0.10 |
| 062 | 7k4l-m1_A_G7_U8 | AAA | AA00 | 97 | 0.12 |
| 063 | 7k4l-m2_A_G7_U8 | AAA | AA00 | 97 | 0.10 |
| 064 | 7k4l-m3_A_G7_U8 | AAA | AA00 | 97 | 0.10 |
| 065 | 7k4l-m4_A_G7_U8 | AAA | AA00 | 97 | 0.12 |
| 066 | 7k4l-m5_A_G7_U8 | AAA | AA00 | 97 | 0.10 |
| 067 | 7k4l-m6_A_G7_U8 | AAA | AA00 | 97 | 0.11 |
| 068 | 7k4l-m7_A_G7_U8 | AAA | AA00 | 97 | 0.12 |
| 069 | 7k4l-m8_A_G7_U8 | AAA | AA00 | 97 | 0.14 |
| 070 | 7k4l-m9_A_G7_U8 | AAA | AA00 | 97 | 0.10 |
| 071 | 7k4l-m10_A_U8_U9 | AAA | AA00 | 98 | 0.11 |
| 072 | 7k4l-m1_A_U8_U9 | AAA | AA00 | 97 | 0.12 |
| 073 | 7k4l-m2_A_U8_U9 | AAA | AA00 | 97 | 0.10 |
| 074 | 7k4l-m3_A_U8_U9 | AAA | AA00 | 97 | 0.12 |
| 075 | 7k4l-m4_A_U8_U9 | AAA | AA00 | 97 | 0.13 |
| 076 | 7k4l-m5_A_U8_U9 | AAA | AA00 | 97 | 0.12 |
| 077 | 7k4l-m6_A_U8_U9 | AAA | AA00 | 97 | 0.12 |
| 078 | 7k4l-m7_A_U8_U9 | AAA | AA00 | 96 | 0.12 |
| 079 | 7k4l-m8_A_U8_U9 | AAA | AA00 | 97 | 0.16 |
| 080 | 7k4l-m9_A_U8_U9 | AAA | AA00 | 97 | 0.12 |
| 081 | 7k4l-m10_A_U9_A10 | AAA | AA00 | 96 | 0.12 |
| 082 | 7k4l-m1_A_U9_A10 | AAA | AA00 | 97 | 0.09 |
| 083 | 7k4l-m2_A_U9_A10 | AAA | AA00 | 97 | 0.08 |
| 084 | 7k4l-m3_A_U9_A10 | AAA | AA00 | 97 | 0.12 |
| 085 | 7k4l-m4_A_U9_A10 | AAA | AA00 | 97 | 0.13 |
| 086 | 7k4l-m5_A_U9_A10 | AAA | AA00 | 96 | 0.13 |
| 087 | 7k4l-m6_A_U9_A10 | AAA | AA00 | 96 | 0.14 |
| 088 | 7k4l-m7_A_U9_A10 | AAA | AA00 | 96 | 0.09 |
| 089 | 7k4l-m8_A_U9_A10 | AAA | AA00 | 95 | 0.16 |
| 090 | 7k4l-m9_A_U9_A10 | AAA | AA00 | 97 | 0.12 |
| 091 | 7k4l-m10_A_A10_G11 | AAA | AA00 | 97 | 0.13 |
| 092 | 7k4l-m1_A_A10_G11 | AAA | AA00 | 97 | 0.07 |
| 093 | 7k4l-m2_A_A10_G11 | AAA | AA00 | 97 | 0.06 |
| 094 | 7k4l-m3_A_A10_G11 | AAA | AA00 | 97 | 0.14 |
| 095 | 7k4l-m4_A_A10_G11 | AAA | AA00 | 97 | 0.15 |
| 096 | 7k4l-m5_A_A10_G11 | AAA | AA00 | 95 | 0.16 |
| 097 | 7k4l-m6_A_A10_G11 | AAA | AA00 | 97 | 0.15 |
| 098 | 7k4l-m7_A_A10_G11 | AAA | AA00 | 96 | 0.08 |
| 099 | 7k4l-m8_A_A10_G11 | AAA | AA00 | 92 | 0.19 |
| 100 | 7k4l-m9_A_A10_G11 | AAA | AA00 | 95 | 0.16 |
| 101 | 7k4l-m10_A_G11_U12 | AAw | AA01 | 83 | 0.28 |
| 102 | 7k4l-m1_A_G11_U12 | AAA | AA00 | 97 | 0.11 |
| 103 | 7k4l-m2_A_G11_U12 | AAA | AA00 | 97 | 0.12 |
| 104 | 7k4l-m3_A_G11_U12 | AAw | AA01 | 84 | 0.28 |
| 105 | 7k4l-m4_A_G11_U12 | AAw | AA01 | 81 | 0.26 |
| 106 | 7k4l-m5_A_G11_U12 | AAw | AA01 | 86 | 0.28 |
| 107 | 7k4l-m6_A_G11_U12 | AAw | AA01 | 79 | 0.31 |
| 108 | 7k4l-m7_A_G11_U12 | AAA | AA00 | 97 | 0.11 |
| 109 | 7k4l-m8_A_G11_U12 | AAw | AA01 | 88 | 0.27 |
| 110 | 7k4l-m9_A_G11_U12 | AAw | AA01 | 82 | 0.31 |
| 111 | 7k4l-m10_A_U12_C13 | AAA | AA00 | 90 | 0.20 |
| 112 | 7k4l-m1_A_U12_C13 | AAA | AA00 | 95 | 0.14 |
| 113 | 7k4l-m2_A_U12_C13 | AAA | AA00 | 93 | 0.16 |
| 114 | 7k4l-m3_A_U12_C13 | AAA | AA00 | 88 | 0.21 |
| 115 | 7k4l-m4_A_U12_C13 | AAA | AA00 | 73 | 0.27 |
| 116 | 7k4l-m5_A_U12_C13 | AAA | AA00 | 92 | 0.17 |
| 117 | 7k4l-m6_A_U12_C13 | AAA | AA00 | 81 | 0.24 |
| 118 | 7k4l-m7_A_U12_C13 | AAA | AA00 | 96 | 0.12 |
| 119 | 7k4l-m8_A_U12_C13 | AAA | AA00 | 91 | 0.18 |
| 120 | 7k4l-m9_A_U12_C13 | AAA | AA00 | 78 | 0.24 |
| 121 | 7k4l-m10_A_C13_U14 | AAA | AA00 | 94 | 0.16 |
| 122 | 7k4l-m1_A_C13_U14 | AAA | AA00 | 93 | 0.15 |
| 123 | 7k4l-m2_A_C13_U14 | AAA | AA00 | 93 | 0.15 |
| 124 | 7k4l-m3_A_C13_U14 | AAA | AA00 | 93 | 0.16 |
| 125 | 7k4l-m4_A_C13_U14 | AAA | AA00 | 92 | 0.16 |
| 126 | 7k4l-m5_A_C13_U14 | AAA | AA00 | 94 | 0.15 |
| 127 | 7k4l-m6_A_C13_U14 | AAA | AA00 | 94 | 0.14 |
| 128 | 7k4l-m7_A_C13_U14 | AAA | AA00 | 96 | 0.13 |
| 129 | 7k4l-m8_A_C13_U14 | AAA | AA00 | 91 | 0.17 |
| 130 | 7k4l-m9_A_C13_U14 | AAA | AA00 | 95 | 0.12 |
| 131 | 7k4l-m10_A_U14_A15 | AAA | AA00 | 96 | 0.12 |
| 132 | 7k4l-m1_A_U14_A15 | AAA | AA00 | 96 | 0.12 |
| 133 | 7k4l-m2_A_U14_A15 | AAA | AA00 | 96 | 0.12 |
| 134 | 7k4l-m3_A_U14_A15 | AAA | AA00 | 96 | 0.12 |
| 135 | 7k4l-m4_A_U14_A15 | AAA | AA00 | 97 | 0.11 |
| 136 | 7k4l-m5_A_U14_A15 | AAA | AA00 | 96 | 0.13 |
| 137 | 7k4l-m6_A_U14_A15 | AAA | AA00 | 97 | 0.10 |
| 138 | 7k4l-m7_A_U14_A15 | AAA | AA00 | 96 | 0.13 |
| 139 | 7k4l-m8_A_U14_A15 | AAA | AA00 | 96 | 0.11 |
| 140 | 7k4l-m9_A_U14_A15 | AAA | AA00 | 97 | 0.11 |
| 141 | 7k4l-m10_A_A15_C16 | AAA | AA00 | 97 | 0.09 |
| 142 | 7k4l-m1_A_A15_C16 | AAA | AA00 | 96 | 0.10 |
| 143 | 7k4l-m2_A_A15_C16 | AAA | AA00 | 96 | 0.09 |
| 144 | 7k4l-m3_A_A15_C16 | AAA | AA00 | 97 | 0.09 |
| 145 | 7k4l-m4_A_A15_C16 | AAA | AA00 | 97 | 0.09 |
| 146 | 7k4l-m5_A_A15_C16 | AAA | AA00 | 97 | 0.09 |
| 147 | 7k4l-m6_A_A15_C16 | AAA | AA00 | 97 | 0.07 |
| 148 | 7k4l-m7_A_A15_C16 | AAA | AA00 | 97 | 0.09 |
| 149 | 7k4l-m8_A_A15_C16 | AAA | AA00 | 97 | 0.08 |
| 150 | 7k4l-m9_A_A15_C16 | AAA | AA00 | 97 | 0.07 |
| 151 | 7k4l-m10_A_C16_G17 | AAA | AA00 | 92 | 0.14 |
| 152 | 7k4l-m1_A_C16_G17 | AAA | AA00 | 95 | 0.12 |
| 153 | 7k4l-m2_A_C16_G17 | AAA | AA00 | 93 | 0.13 |
| 154 | 7k4l-m3_A_C16_G17 | AAA | AA00 | 95 | 0.12 |
| 155 | 7k4l-m4_A_C16_G17 | AAA | AA00 | 95 | 0.12 |
| 156 | 7k4l-m5_A_C16_G17 | AAA | AA00 | 93 | 0.13 |
| 157 | 7k4l-m6_A_C16_G17 | AAA | AA00 | 95 | 0.11 |
| 158 | 7k4l-m7_A_C16_G17 | AAA | AA00 | 91 | 0.14 |
| 159 | 7k4l-m8_A_C16_G17 | AAA | AA00 | 94 | 0.11 |
| 160 | 7k4l-m9_A_C16_G17 | AAA | AA00 | 93 | 0.12 |
| 161 | 7k4l-m10_A_G17_U18 | AAA | AA00 | 94 | 0.20 |
| 162 | 7k4l-m1_A_G17_U18 | AAA | AA00 | 96 | 0.18 |
| 163 | 7k4l-m2_A_G17_U18 | AAA | AA00 | 93 | 0.20 |
| 164 | 7k4l-m3_A_G17_U18 | AAA | AA00 | 94 | 0.19 |
| 165 | 7k4l-m4_A_G17_U18 | AAA | AA00 | 95 | 0.18 |
| 166 | 7k4l-m5_A_G17_U18 | AAA | AA00 | 93 | 0.20 |
| 167 | 7k4l-m6_A_G17_U18 | AAA | AA00 | 97 | 0.12 |
| 168 | 7k4l-m7_A_G17_U18 | AAA | AA00 | 90 | 0.20 |
| 169 | 7k4l-m8_A_G17_U18 | AAA | AA00 | 97 | 0.13 |
| 170 | 7k4l-m9_A_G17_U18 | AAA | AA00 | 96 | 0.15 |
| 171 | 7k4l-m10_A_U18_U19 | AAw | AA01 | 81 | 0.27 |
| 172 | 7k4l-m1_A_U18_U19 | AAw | AA01 | 82 | 0.27 |
| 173 | 7k4l-m2_A_U18_U19 | AAw | AA01 | 79 | 0.34 |
| 174 | 7k4l-m3_A_U18_U19 | AAw | AA01 | 69 | 0.36 |
| 175 | 7k4l-m4_A_U18_U19 | AAw | AA01 | 85 | 0.23 |
| 176 | 7k4l-m5_A_U18_U19 | AAw | AA01 | 80 | 0.28 |
| 177 | 7k4l-m6_A_U18_U19 | AAA | AA00 | 90 | 0.21 |
| 178 | 7k4l-m7_A_U18_U19 | AAw | AA01 | 76 | 0.34 |
| 179 | 7k4l-m8_A_U18_U19 | AAA | AA00 | 93 | 0.22 |
| 180 | 7k4l-m9_A_U18_U19 | AAA | AA00 | 89 | 0.25 |
| 181 | 7k4l-m10_A_U19_U20 | OPN | OP09 | 58 | 0.41 |
| 182 | 7k4l-m1_A_U19_U20 | OPN | OP09 | 48 | 0.51 |
| 183 | 7k4l-m2_A_U19_U20 | OPN | OP09 | 50 | 0.50 |
| 184 | 7k4l-m3_A_U19_U20 | NAN | NANT | 0 | 1.48 |
| 185 | 7k4l-m4_A_U19_U20 | NAN | NANT | 0 | 2.03 |
| 186 | 7k4l-m5_A_U19_U20 | OPN | OP09 | 51 | 0.43 |
| 187 | 7k4l-m6_A_U19_U20 | OPN | OP09 | 47 | 0.44 |
| 188 | 7k4l-m7_A_U19_U20 | OPN | OP09 | 36 | 0.56 |
| 189 | 7k4l-m8_A_U19_U20 | OPN | OP09 | 42 | 0.50 |
| 190 | 7k4l-m9_A_U19_U20 | OPN | OP09 | 39 | 0.49 |
| 191 | 7k4l-m10_A_U20_C21 | OPN | OP20 | 72 | 0.39 |
| 192 | 7k4l-m1_A_U20_C21 | OPN | OP20 | 27 | 0.55 |
| 193 | 7k4l-m2_A_U20_C21 | OPN | OP20 | 68 | 0.40 |
| 194 | 7k4l-m3_A_U20_C21 | NAN | NANT | 0 | 0.59 |
| 195 | 7k4l-m4_A_U20_C21 | NAN | NANT | 0 | 0.45 |
| 196 | 7k4l-m5_A_U20_C21 | OPN | OP20 | 72 | 0.40 |
| 197 | 7k4l-m6_A_U20_C21 | OPN | OP20 | 70 | 0.35 |
| 198 | 7k4l-m7_A_U20_C21 | OPN | OP20 | 48 | 0.31 |
| 199 | 7k4l-m8_A_U20_C21 | OPN | OP20 | 68 | 0.40 |
| 200 | 7k4l-m9_A_U20_C21 | OPN | OP20 | 65 | 0.39 |
| 201 | 7k4l-m10_A_C21_G22 | NAN | NANT | 0 | 0.41 |
| 202 | 7k4l-m1_A_C21_G22 | ZZZ | ZZ1S | 23 | 0.35 |
| 203 | 7k4l-m2_A_C21_G22 | NAN | NANT | 0 | 1.24 |
| 204 | 7k4l-m3_A_C21_G22 | NAN | NANT | 0 | 1.53 |
| 205 | 7k4l-m4_A_C21_G22 | NAN | NANT | 0 | 0.40 |
| 206 | 7k4l-m5_A_C21_G22 | NAN | NANT | 0 | 0.43 |
| 207 | 7k4l-m6_A_C21_G22 | ZZZ | ZZ1S | 40 | 0.33 |
| 208 | 7k4l-m7_A_C21_G22 | NAN | NANT | 0 | 1.05 |
| 209 | 7k4l-m8_A_C21_G22 | ZZZ | ZZ1S | 19 | 0.32 |
| 210 | 7k4l-m9_A_C21_G22 | ZZZ | ZZ1S | 30 | 0.33 |
| 211 | 7k4l-m10_A_G22_A23 | NAN | NANT | 0 | 0.36 |
| 212 | 7k4l-m1_A_G22_A23 | NAN | NANT | 0 | 0.32 |
| 213 | 7k4l-m2_A_G22_A23 | NAN | NANT | 0 | 0.37 |
| 214 | 7k4l-m3_A_G22_A23 | NAN | NANT | 0 | 0.29 |
| 215 | 7k4l-m4_A_G22_A23 | NAN | NANT | 0 | 0.39 |
| 216 | 7k4l-m5_A_G22_A23 | NAN | NANT | 0 | 0.36 |
| 217 | 7k4l-m6_A_G22_A23 | NAN | NANT | 0 | 0.43 |
| 218 | 7k4l-m7_A_G22_A23 | AAA | AA08 | 40 | 0.38 |
| 219 | 7k4l-m8_A_G22_A23 | NAN | NANT | 0 | 0.55 |
| 220 | 7k4l-m9_A_G22_A23 | NAN | NANT | 0 | 0.49 |
| 221 | 7k4l-m10_A_A23_C24 | AAA | AA00 | 97 | 0.07 |
| 222 | 7k4l-m1_A_A23_C24 | AAA | AA00 | 97 | 0.09 |
| 223 | 7k4l-m2_A_A23_C24 | AAA | AA00 | 97 | 0.09 |
| 224 | 7k4l-m3_A_A23_C24 | AAA | AA00 | 96 | 0.09 |
| 225 | 7k4l-m4_A_A23_C24 | AAA | AA00 | 96 | 0.09 |
| 226 | 7k4l-m5_A_A23_C24 | AAA | AA00 | 97 | 0.09 |
| 227 | 7k4l-m6_A_A23_C24 | AAA | AA00 | 97 | 0.10 |
| 228 | 7k4l-m7_A_A23_C24 | AAA | AA00 | 97 | 0.07 |
| 229 | 7k4l-m8_A_A23_C24 | AAA | AA00 | 96 | 0.08 |
| 230 | 7k4l-m9_A_A23_C24 | AAA | AA00 | 97 | 0.07 |
| 231 | 7k4l-m10_A_C24_G25 | AAA | AA00 | 96 | 0.09 |
| 232 | 7k4l-m1_A_C24_G25 | AAA | AA00 | 97 | 0.09 |
| 233 | 7k4l-m2_A_C24_G25 | AAA | AA00 | 97 | 0.10 |
| 234 | 7k4l-m3_A_C24_G25 | AAA | AA00 | 97 | 0.10 |
| 235 | 7k4l-m4_A_C24_G25 | AAA | AA00 | 95 | 0.09 |
| 236 | 7k4l-m5_A_C24_G25 | AAA | AA00 | 96 | 0.09 |
| 237 | 7k4l-m6_A_C24_G25 | AAA | AA00 | 96 | 0.09 |
| 238 | 7k4l-m7_A_C24_G25 | AAA | AA00 | 97 | 0.09 |
| 239 | 7k4l-m8_A_C24_G25 | AAA | AA00 | 96 | 0.09 |
| 240 | 7k4l-m9_A_C24_G25 | AAA | AA00 | 96 | 0.08 |
| 241 | 7k4l-m10_A_G25_U26 | AAA | AA00 | 97 | 0.11 |
| 242 | 7k4l-m1_A_G25_U26 | AAA | AA00 | 97 | 0.12 |
| 243 | 7k4l-m2_A_G25_U26 | AAA | AA00 | 96 | 0.14 |
| 244 | 7k4l-m3_A_G25_U26 | AAA | AA00 | 97 | 0.12 |
| 245 | 7k4l-m4_A_G25_U26 | AAA | AA00 | 97 | 0.10 |
| 246 | 7k4l-m5_A_G25_U26 | AAA | AA00 | 97 | 0.13 |
| 247 | 7k4l-m6_A_G25_U26 | AAA | AA00 | 98 | 0.10 |
| 248 | 7k4l-m7_A_G25_U26 | AAA | AA00 | 97 | 0.12 |
| 249 | 7k4l-m8_A_G25_U26 | AAA | AA00 | 97 | 0.13 |
| 250 | 7k4l-m9_A_G25_U26 | AAA | AA00 | 97 | 0.09 |
| 251 | 7k4l-m10_A_U26_A27 | AAA | AA00 | 96 | 0.14 |
| 252 | 7k4l-m1_A_U26_A27 | AAA | AA00 | 96 | 0.14 |
| 253 | 7k4l-m2_A_U26_A27 | AAA | AA00 | 95 | 0.16 |
| 254 | 7k4l-m3_A_U26_A27 | AAA | AA00 | 96 | 0.14 |
| 255 | 7k4l-m4_A_U26_A27 | AAA | AA00 | 97 | 0.10 |
| 256 | 7k4l-m5_A_U26_A27 | AAA | AA00 | 94 | 0.16 |
| 257 | 7k4l-m6_A_U26_A27 | AAA | AA00 | 95 | 0.14 |
| 258 | 7k4l-m7_A_U26_A27 | AAA | AA00 | 96 | 0.14 |
| 259 | 7k4l-m8_A_U26_A27 | AAA | AA00 | 96 | 0.14 |
| 260 | 7k4l-m9_A_U26_A27 | AAA | AA00 | 95 | 0.13 |
| 261 | 7k4l-m10_A_A27_G28 | AAA | AA00 | 92 | 0.14 |
| 262 | 7k4l-m1_A_A27_G28 | AAA | AA00 | 95 | 0.15 |
| 263 | 7k4l-m2_A_A27_G28 | AAA | AA00 | 95 | 0.18 |
| 264 | 7k4l-m3_A_A27_G28 | AAA | AA00 | 94 | 0.14 |
| 265 | 7k4l-m4_A_A27_G28 | AAA | AA00 | 96 | 0.09 |
| 266 | 7k4l-m5_A_A27_G28 | AAA | AA00 | 93 | 0.18 |
| 267 | 7k4l-m6_A_A27_G28 | AAA | AA00 | 94 | 0.14 |
| 268 | 7k4l-m7_A_A27_G28 | AAA | AA00 | 93 | 0.14 |
| 269 | 7k4l-m8_A_A27_G28 | AAA | AA00 | 94 | 0.17 |
| 270 | 7k4l-m9_A_A27_G28 | AAA | AA00 | 95 | 0.12 |
| 271 | 7k4l-m10_A_G28_U29 | AAw | AA01 | 85 | 0.32 |
| 272 | 7k4l-m1_A_G28_U29 | AAw | AA01 | 85 | 0.30 |
| 273 | 7k4l-m2_A_G28_U29 | AAw | AA01 | 82 | 0.24 |
| 274 | 7k4l-m3_A_G28_U29 | AAw | AA01 | 84 | 0.32 |
| 275 | 7k4l-m4_A_G28_U29 | AAA | AA00 | 96 | 0.14 |
| 276 | 7k4l-m5_A_G28_U29 | AAw | AA01 | 82 | 0.27 |
| 277 | 7k4l-m6_A_G28_U29 | AAA | AA00 | 95 | 0.17 |
| 278 | 7k4l-m7_A_G28_U29 | AAw | AA01 | 86 | 0.31 |
| 279 | 7k4l-m8_A_G28_U29 | AAw | AA01 | 84 | 0.32 |
| 280 | 7k4l-m9_A_G28_U29 | AAA | AA00 | 95 | 0.14 |
| 281 | 7k4l-m10_A_U29_U30 | AAA | AA00 | 95 | 0.11 |
| 282 | 7k4l-m1_A_U29_U30 | AAA | AA00 | 94 | 0.12 |
| 283 | 7k4l-m2_A_U29_U30 | AAw | AA01 | 87 | 0.25 |
| 284 | 7k4l-m3_A_U29_U30 | AAA | AA00 | 96 | 0.10 |
| 285 | 7k4l-m4_A_U29_U30 | AAA | AA00 | 92 | 0.15 |
| 286 | 7k4l-m5_A_U29_U30 | AAw | AA01 | 85 | 0.28 |
| 287 | 7k4l-m6_A_U29_U30 | AAw | AA01 | 84 | 0.29 |
| 288 | 7k4l-m7_A_U29_U30 | AAA | AA00 | 95 | 0.12 |
| 289 | 7k4l-m8_A_U29_U30 | AAA | AA00 | 92 | 0.12 |
| 290 | 7k4l-m9_A_U29_U30 | AAw | AA01 | 80 | 0.33 |
| 291 | 7k4l-m10_A_U30_C31 | AAA | AA00 | 97 | 0.11 |
| 292 | 7k4l-m1_A_U30_C31 | AAA | AA00 | 97 | 0.08 |
| 293 | 7k4l-m2_A_U30_C31 | AAA | AA00 | 97 | 0.10 |
| 294 | 7k4l-m3_A_U30_C31 | AAA | AA00 | 97 | 0.10 |
| 295 | 7k4l-m4_A_U30_C31 | AAA | AA00 | 97 | 0.08 |
| 296 | 7k4l-m5_A_U30_C31 | AAA | AA00 | 94 | 0.14 |
| 297 | 7k4l-m6_A_U30_C31 | AAA | AA00 | 97 | 0.09 |
| 298 | 7k4l-m7_A_U30_C31 | AAA | AA00 | 97 | 0.10 |
| 299 | 7k4l-m8_A_U30_C31 | AAA | AA00 | 97 | 0.11 |
| 300 | 7k4l-m9_A_U30_C31 | AAA | AA00 | 97 | 0.10 |
| 301 | 7k4l-m10_A_C31_U32 | AAA | AA00 | 95 | 0.12 |
| 302 | 7k4l-m1_A_C31_U32 | AAA | AA00 | 96 | 0.12 |
| 303 | 7k4l-m2_A_C31_U32 | AAA | AA00 | 96 | 0.12 |
| 304 | 7k4l-m3_A_C31_U32 | AAA | AA00 | 96 | 0.12 |
| 305 | 7k4l-m4_A_C31_U32 | AAA | AA00 | 96 | 0.11 |
| 306 | 7k4l-m5_A_C31_U32 | AAA | AA00 | 94 | 0.14 |
| 307 | 7k4l-m6_A_C31_U32 | AAA | AA00 | 97 | 0.11 |
| 308 | 7k4l-m7_A_C31_U32 | AAA | AA00 | 96 | 0.13 |
| 309 | 7k4l-m8_A_C31_U32 | AAA | AA00 | 96 | 0.14 |
| 310 | 7k4l-m9_A_C31_U32 | AAA | AA00 | 96 | 0.12 |
| 311 | 7k4l-m10_A_U32_A33 | AAA | AA00 | 97 | 0.09 |
| 312 | 7k4l-m1_A_U32_A33 | AAA | AA00 | 97 | 0.09 |
| 313 | 7k4l-m2_A_U32_A33 | AAA | AA00 | 97 | 0.09 |
| 314 | 7k4l-m3_A_U32_A33 | AAA | AA00 | 97 | 0.08 |
| 315 | 7k4l-m4_A_U32_A33 | AAA | AA00 | 97 | 0.10 |
| 316 | 7k4l-m5_A_U32_A33 | AAA | AA00 | 97 | 0.09 |
| 317 | 7k4l-m6_A_U32_A33 | AAA | AA00 | 97 | 0.09 |
| 318 | 7k4l-m7_A_U32_A33 | AAA | AA00 | 96 | 0.10 |
| 319 | 7k4l-m8_A_U32_A33 | AAA | AA00 | 97 | 0.11 |
| 320 | 7k4l-m9_A_U32_A33 | AAA | AA00 | 97 | 0.09 |
| 321 | 7k4l-m10_A_A33_A34 | AAA | AA00 | 98 | 0.07 |
| 322 | 7k4l-m1_A_A33_A34 | AAA | AA00 | 98 | 0.08 |
| 323 | 7k4l-m2_A_A33_A34 | AAA | AA00 | 98 | 0.08 |
| 324 | 7k4l-m3_A_A33_A34 | AAA | AA00 | 98 | 0.07 |
| 325 | 7k4l-m4_A_A33_A34 | AAA | AA00 | 98 | 0.08 |
| 326 | 7k4l-m5_A_A33_A34 | AAA | AA00 | 98 | 0.08 |
| 327 | 7k4l-m6_A_A33_A34 | AAA | AA00 | 97 | 0.07 |
| 328 | 7k4l-m7_A_A33_A34 | AAA | AA00 | 98 | 0.09 |
| 329 | 7k4l-m8_A_A33_A34 | AAA | AA00 | 98 | 0.09 |
| 330 | 7k4l-m9_A_A33_A34 | AAA | AA00 | 98 | 0.07 |
| 331 | 7k4l-m10_A_A34_C35 | AAA | AA00 | 96 | 0.10 |
| 332 | 7k4l-m1_A_A34_C35 | AAA | AA00 | 97 | 0.10 |
| 333 | 7k4l-m2_A_A34_C35 | AAA | AA00 | 97 | 0.10 |
| 334 | 7k4l-m3_A_A34_C35 | AAA | AA00 | 97 | 0.09 |
| 335 | 7k4l-m4_A_A34_C35 | AAA | AA00 | 98 | 0.08 |
| 336 | 7k4l-m5_A_A34_C35 | AAA | AA00 | 97 | 0.12 |
| 337 | 7k4l-m6_A_A34_C35 | AAA | AA00 | 97 | 0.09 |
| 338 | 7k4l-m7_A_A34_C35 | AAA | AA00 | 97 | 0.11 |
| 339 | 7k4l-m8_A_A34_C35 | AAA | AA00 | 96 | 0.13 |
| 340 | 7k4l-m9_A_A34_C35 | AAA | AA00 | 97 | 0.10 |
| 341 | 7k4l-m10_A_C35_C36 | AAA | AA00 | 94 | 0.14 |
| 342 | 7k4l-m1_A_C35_C36 | AAA | AA00 | 94 | 0.16 |
| 343 | 7k4l-m2_A_C35_C36 | AAA | AA00 | 93 | 0.15 |
| 344 | 7k4l-m3_A_C35_C36 | AAA | AA00 | 94 | 0.14 |
| 345 | 7k4l-m4_A_C35_C36 | AAA | AA00 | 94 | 0.14 |
| 346 | 7k4l-m5_A_C35_C36 | AAA | AA00 | 93 | 0.18 |
| 347 | 7k4l-m6_A_C35_C36 | AAA | AA00 | 94 | 0.15 |
| 348 | 7k4l-m7_A_C35_C36 | AAA | AA00 | 92 | 0.18 |
| 349 | 7k4l-m8_A_C35_C36 | AAA | AA00 | 85 | 0.22 |
| 350 | 7k4l-m9_A_C35_C36 | AAA | AA00 | 91 | 0.17 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
Show
| Color by conformation group (pyramids) | |
|---|---|
| group | |||||||||
| visible |
| Color by NtC (balls) |
|---|
| A | ||||
|---|---|---|---|---|
| A-B | ||||
|---|---|---|---|---|
| B-A | ||||
|---|---|---|---|---|
| B | ||||
|---|---|---|---|---|
| IC | ||||
|---|---|---|---|---|
| OPN | ||||
|---|---|---|---|---|
| Z | ||||
|---|---|---|---|---|
| N | ||||
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