DNATCO v4.1: results

Crystal structures of artificially designed homomeric RNA nanoarchitectures

Results of the assignment of 256 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	7jrs_A_G1_G2	AAA	AA00	81	0.13	AA00
002	7jrs_A_G2_A3	AAw	AA06	83	0.22	AA06
003	7jrs_A_A3_C4	AAA	AA00	71	0.20	AA00
004	7jrs_A_C4_G5	AAw	AA06	89	0.18	AA06
005	7jrs_A_G5_C6	AAA	AA08	86	0.17	AA08
006	7jrs_A_C6_G7	NAN	NANT	0	0.55	AA10
007	7jrs_A_G7_G8	AAw	AA01	41	0.36	AA01
008	7jrs_A_G8_U9	AAA	AA00	68	0.26	AA00
009	7jrs_A_U9_A10	AAA	AA00	85	0.10	AA00
010	7jrs_A_A10_G11	AAw	AA01	83	0.18	AA01
011	7jrs_A_G11_C12	AAA	AA00	74	0.17	AA00
012	7jrs_A_C12_G13	AAA	AA00	93	0.16	AA00
013	7jrs_A_G13_A14	NAN	NANT	0	0.92	BB1S
014	7jrs_A_A14_A15	NAN	NANT	0	0.51	OP21
015	7jrs_A_A15_G16	NAN	NANT	0	0.72	OP20
016	7jrs_A_G16_A17	OPN	OP10	81	0.20	OP10
017	7jrs_A_A17_A18	AAA	AA00	79	0.21	AA00
018	7jrs_A_A18_C19	AAA	AA08	49	0.46	AA08
019	7jrs_A_C19_C20	AAA	AA00	70	0.23	AA00
020	7jrs_A_C20_A21	AAA	AA00	79	0.15	AA00
021	7jrs_A_A21_U22	AAA	AA00	89	0.08	AA00
022	7jrs_A_U22_C23	AAA	AA00	93	0.09	AA00
023	7jrs_A_C23_G24	AAA	AA00	87	0.16	AA00
024	7jrs_A_G24_A25	AAA	AA00	80	0.20	AA00
025	7jrs_A_A25_C26	AAA	AA00	93	0.13	AA00
026	7jrs_A_C26_U27	AAA	AA00	14	0.27	AA00
027	7jrs_A_U27_G28	NAN	NANT	0	0.74	IC03
028	7jrs_A_G28_C29	OPN	OP12	83	0.17	OP12
029	7jrs_A_C29_G30	AAA	AA00	34	0.35	AA00
030	7jrs_A_G30_A31	AAA	AA00	91	0.12	AA00
031	7jrs_A_A31_C32	AAA	AA00	86	0.18	AA00
032	7jrs_A_C32_U33	AAA	AA00	82	0.24	AA00
033	7jrs_A_U33_U34	AAA	AA00	90	0.16	AA00
034	7jrs_A_U34_A35	AAA	AA00	83	0.12	AA00
035	7jrs_A_A35_G36	AAA	AA00	91	0.10	AA00
036	7jrs_A_G36_C37	AAA	AA00	82	0.14	AA00
037	7jrs_A_C37_G38	AAA	AA00	89	0.17	AA00
038	7jrs_A_G38_A39	AAA	AA00	81	0.21	AA00
039	7jrs_A_A39_G40	NAN	NANT	0	1.52	OP06
040	7jrs_A_G40_C41	AAw	AA01	68	0.30	AA01
041	7jrs_A_C41_C42	AAA	AA00	90	0.15	AA00
042	7jrs_A_C42_U43	AAA	AA00	89	0.10	AA00
043	7jrs_A_U43_G44	AAA	AA00	85	0.11	AA00
044	7jrs_A_G44_C45	AAA	AA00	87	0.14	AA00
045	7jrs_A_C45_C46	AAA	AA00	89	0.12	AA00
046	7jrs_A_C46_C47	AAA	AA00	85	0.12	AA00
047	7jrs_A_C47_U48	AAA	AA00	81	0.14	AA00
048	7jrs_A_U48_G49	AAA	AA00	87	0.11	AA00
049	7jrs_A_G49_G50	AAA	AA00	82	0.17	AA00
050	7jrs_A_G50_C51	AAA	AA00	74	0.22	AA00
051	7jrs_A_C51_A52	AAA	AA00	74	0.14	AA00
052	7jrs_A_A52_G53	AAA	AA08	86	0.19	AA08
053	7jrs_A_G53_U54	AAA	AA00	72	0.24	AA00
054	7jrs_A_U54_G55	AAA	AA00	77	0.13	AA00
055	7jrs_A_G55_G56	AAA	AA08	75	0.38	AA08
056	7jrs_A_G56_G57	NAN	NANT	0	0.38	AB05
057	7jrs_A_G57_A58	NAN	NANT	0	0.72	BB08
058	7jrs_A_A58_G59	OPN	OP24	41	0.49	OP24
059	7jrs_A_G59_C60	AAA	AA00	92	0.14	AA00
060	7jrs_A_C60_C61	AAA	AA00	93	0.12	AA00
061	7jrs_A_C61_U62	AAA	AA00	93	0.13	AA00
062	7jrs_A_U62_G63	AAA	AA00	90	0.15	AA00
063	7jrs_A_G63_A64	ZZZ	ZZ01	82	0.33	ZZ01
064	7jrs_A_A64_A65	NAN	NANT	0	1.01	BB07
065	7jrs_A_A65_G66	NAN	NANT	0	1.66	OP06
066	7jrs_A_G66_C67	AAA	AA08	80	0.20	AA08
067	7jrs_A_C67_A68	AAA	AA08	93	0.22	AA08
068	7jrs_A_A68_G69	AAw	AA01	80	0.28	AA01
069	7jrs_A_G69_G70	AAA	AA08	82	0.18	AA08
070	7jrs_A_G70_C71	A-B	AB05	47	0.40	AB05
071	7jrs_A_C71_A72	NAN	NANT	0	0.97	AB02
072	7jrs_A_A72_C73	NAN	NANT	0	0.61	AB02
073	7jrs_A_C73_G74	AAA	AA00	59	0.15	AA00
074	7jrs_A_G74_G75	AAA	AA00	66	0.13	AA00
075	7jrs_A_G75_G76	AAA	AA00	81	0.11	AA00
076	7jrs_A_G76_C77	AAA	AA00	87	0.14	AA00
077	7jrs_A_C77_G78	AAA	AA00	84	0.18	AA00
078	7jrs_A_G78_A79	NAN	NANT	0	1.15	BB2S
079	7jrs_A_A79_A80	NAN	NANT	0	0.51	OP21
080	7jrs_A_A80_G81	NAN	NANT	0	0.76	OP20
081	7jrs_A_G81_A82	NAN	NANT	0	0.52	OP26
082	7jrs_A_A82_A83	AAA	AA00	77	0.27	AA00
083	7jrs_A_A83_C84	AAA	AA08	67	0.40	AA08
084	7jrs_A_C84_A85	AAA	AA00	86	0.13	AA00
085	7jrs_A_A85_C86	AAA	AA00	81	0.12	AA00
086	7jrs_A_C86_U87	AAA	AA00	72	0.21	AA00
087	7jrs_A_U87_G88	AAA	AA00	79	0.14	AA00
088	7jrs_A_G88_U89	AAA	AA00	87	0.17	AA00
089	7jrs_A_U89_C90	AAA	AA00	62	0.29	AA00
090	7jrs_A_C90_A91	AAA	AA00	92	0.10	AA00
091	7jrs_A_A91_G92	AAA	AA08	64	0.28	AA08
092	7jrs_A_G92_G93	A-B	AB05	72	0.33	AB05
093	7jrs_A_G93_U94	OPN	OP12	73	0.24	OP12
094	7jrs_A_U94_C95	AAA	AA00	93	0.13	AA00
095	7jrs_A_C95_G96	AAA	AA08	92	0.18	AA08
096	7jrs_A_G96_C97	AAA	AA00	83	0.19	AA00
097	7jrs_A_C97_U98	AAA	AA00	92	0.11	AA00
098	7jrs_A_U98_G99	AAA	AA00	81	0.15	AA00
099	7jrs_A_G99_A100	AAA	AA00	81	0.13	AA00
100	7jrs_A_A100_G101	AAw	AA01	90	0.14	AA01
101	7jrs_A_G101_U102	AAA	AA00	62	0.20	AA00
102	7jrs_A_U102_C103	AAA	AA08	86	0.15	AA08
103	7jrs_A_C103_G104	AAA	AA00	78	0.21	AA00
104	7jrs_A_G104_G105	NAN	NANT	0	1.59	OP06
105	7jrs_A_G105_C106	AAA	AA00	95	0.13	AA00
106	7jrs_A_C106_G107	AAA	AA00	91	0.15	AA00
107	7jrs_A_G107_U108	AAA	AA00	92	0.14	AA00
108	7jrs_A_U108_C109	AAA	AA00	84	0.17	AA00
109	7jrs_A_C109_C110	AAw	AA06	74	0.23	AA06
110	7jrs_A_C110_C111	AAA	AA00	59	0.29	AA00
111	7jrs_A_C111_A112	AAw	AA01	51	0.26	AA01
112	7jrs_A_A112_G113	AAA	AA00	51	0.26	AA00
113	7jrs_A_G113_U114	AAA	AA00	94	0.10	AA00
114	7jrs_A_U114_U115	AAA	AA00	77	0.24	AA00
115	7jrs_A_U115_G116	AAA	AA00	55	0.25	AA00
116	7jrs_A_G116_A117	AAA	AA00	93	0.10	AA00
117	7jrs_A_A117_U118	AAA	AA00	89	0.11	AA00
118	7jrs_A_U118_G119	AAA	AA08	84	0.24	AA08
119	7jrs_A_G119_G120	AAw	AA10	74	0.31	AA10
120	7jrs_A_G120_G121	AAA	AA00	14	0.48	AA00
121	7jrs_A_G121_G122	A-B	AB05	51	0.35	AB05
122	7jrs_A_G122_A123	NAN	NANT	0	0.86	OP22
123	7jrs_A_A123_G124	NAN	NANT	0	0.85	BA17
124	7jrs_A_G124_C125	AAA	AA00	91	0.17	AA00
125	7jrs_A_C125_U126	AAA	AA00	95	0.12	AA00
126	7jrs_A_U126_A127	AAA	AA00	91	0.12	AA00
127	7jrs_A_A127_C128	AAA	AA00	46	0.32	AA00
128	7jrs_A_C128_C129	NAN	NANT	0	1.94	OP01
129	7jrs_B_G1_G2	AAA	AA00	62	0.19	AA00
130	7jrs_B_G2_A3	AAw	AA01	72	0.26	AA01
131	7jrs_B_A3_C4	AAA	AA08	89	0.11	AA08
132	7jrs_B_C4_G5	AAA	AA00	81	0.11	AA00
133	7jrs_B_G5_C6	AAA	AA00	89	0.08	AA00
134	7jrs_B_C6_G7	AAA	AA00	83	0.17	AA00
135	7jrs_B_G7_G8	AAA	AA00	71	0.21	AA00
136	7jrs_B_G8_U9	NAN	NANT	0	0.69	AA10
137	7jrs_B_U9_A10	AAA	AA00	33	0.37	AA00
138	7jrs_B_A10_G11	AAw	AA01	66	0.21	AA01
139	7jrs_B_G11_C12	AAA	AA00	76	0.16	AA00
140	7jrs_B_C12_G13	AAA	AA00	85	0.27	AA00
141	7jrs_B_G13_A14	NAN	NANT	0	0.85	OP08
142	7jrs_B_A14_A15	NAN	NANT	0	1.64	OP25
143	7jrs_B_A15_G16	NAN	NANT	0	0.91	OPS1
144	7jrs_B_G16_A17	OPN	OP10	86	0.16	OP10
145	7jrs_B_A17_A18	AAA	AA00	65	0.29	AA00
146	7jrs_B_A18_C19	AAA	AA08	65	0.41	AA08
147	7jrs_B_C19_C20	AAA	AA00	91	0.13	AA00
148	7jrs_B_C20_A21	AAA	AA00	92	0.13	AA00
149	7jrs_B_A21_U22	AAA	AA00	69	0.25	AA00
150	7jrs_B_U22_C23	AAA	AA00	84	0.15	AA00
151	7jrs_B_C23_G24	AAA	AA00	87	0.18	AA00
152	7jrs_B_G24_A25	AAA	AA00	95	0.10	AA00
153	7jrs_B_A25_C26	AAA	AA00	91	0.13	AA00
154	7jrs_B_C26_U27	AAA	AA00	48	0.29	AA00
155	7jrs_B_U27_G28	A-B	AB05	75	0.34	AB05
156	7jrs_B_G28_C29	OPN	OP12	69	0.23	OP12
157	7jrs_B_C29_G30	AAA	AA00	88	0.11	AA00
158	7jrs_B_G30_A31	AAA	AA00	85	0.13	AA00
159	7jrs_B_A31_C32	AAA	AA00	87	0.12	AA00
160	7jrs_B_C32_U33	AAA	AA00	91	0.11	AA00
161	7jrs_B_U33_U34	AAA	AA00	78	0.17	AA00
162	7jrs_B_U34_A35	AAA	AA00	73	0.17	AA00
163	7jrs_B_A35_G36	AAA	AA00	89	0.15	AA00
164	7jrs_B_G36_C37	AAA	AA00	77	0.23	AA00
165	7jrs_B_C37_G38	AAA	AA00	87	0.09	AA00
166	7jrs_B_G38_A39	AAA	AA00	84	0.17	AA00
167	7jrs_B_A39_G40	NAN	NANT	0	1.52	OP06
168	7jrs_B_G40_C41	AAA	AA00	89	0.15	AA00
169	7jrs_B_C41_C42	AAA	AA00	95	0.10	AA00
170	7jrs_B_C42_U43	AAA	AA08	90	0.15	AA08
171	7jrs_B_U43_G44	AAA	AA00	63	0.27	AA00
172	7jrs_B_G44_C45	AAA	AA00	77	0.17	AA00
173	7jrs_B_C45_C46	AAA	AA00	96	0.11	AA00
174	7jrs_B_C46_C47	AAA	AA00	87	0.20	AA00
175	7jrs_B_C47_U48	AAA	AA00	80	0.21	AA00
176	7jrs_B_U48_G49	AAA	AA00	95	0.10	AA00
177	7jrs_B_G49_G50	AAA	AA00	89	0.16	AA00
178	7jrs_B_G50_C51	AAA	AA00	69	0.25	AA00
179	7jrs_B_C51_A52	AAA	AA00	92	0.11	AA00
180	7jrs_B_A52_G53	AAA	AA00	91	0.10	AA00
181	7jrs_B_G53_U54	AAA	AA00	89	0.15	AA00
182	7jrs_B_U54_G55	AAw	AA10	79	0.18	AA10
183	7jrs_B_G55_G56	AAA	AA00	16	0.57	AA00
184	7jrs_B_G56_G57	A-B	AB05	47	0.31	AB05
185	7jrs_B_G57_A58	NAN	NANT	0	0.65	BB08
186	7jrs_B_A58_G59	NAN	NANT	0	0.94	OP23
187	7jrs_B_G59_C60	AAA	AA00	88	0.21	AA00
188	7jrs_B_C60_C61	AAA	AA00	95	0.11	AA00
189	7jrs_B_C61_U62	AAA	AA00	94	0.15	AA00
190	7jrs_B_U62_G63	AAA	AA00	50	0.28	AA00
191	7jrs_B_G63_A64	NAN	NANT	0	0.67	AA01
192	7jrs_B_A64_A65	NAN	NANT	0	1.29	IC01
193	7jrs_B_A65_G66	NAN	NANT	0	1.22	OP25
194	7jrs_B_G66_C67	AAA	AA00	75	0.18	AA00
195	7jrs_B_C67_A68	AAw	AA06	98	0.18	AA06
196	7jrs_B_A68_G69	AAw	AA06	60	0.35	AA06
197	7jrs_B_G69_G70	AAA	AA08	86	0.18	AA08
198	7jrs_B_G70_C71	AAA	AA08	93	0.18	AA08
199	7jrs_B_C71_A72	NAN	NANT	0	0.66	AA10
200	7jrs_B_A72_C73	AAA	AA00	41	0.33	AA00
201	7jrs_B_C73_G74	AAA	AA00	95	0.12	AA00
202	7jrs_B_G74_G75	AAA	AA00	91	0.10	AA00
203	7jrs_B_G75_G76	AAA	AA00	91	0.10	AA00
204	7jrs_B_G76_C77	AAA	AA00	85	0.16	AA00
205	7jrs_B_C77_G78	AAA	AA00	93	0.12	AA00
206	7jrs_B_G78_A79	NAN	NANT	0	0.95	BB2S
207	7jrs_B_A79_A80	NAN	NANT	0	0.48	OP21
208	7jrs_B_A80_G81	NAN	NANT	0	0.86	OP20
209	7jrs_B_G81_A82	OPN	OP10	85	0.19	OP10
210	7jrs_B_A82_A83	AAA	AA00	81	0.17	AA00
211	7jrs_B_A83_C84	AAA	AA08	48	0.47	AA08
212	7jrs_B_C84_A85	AAA	AA00	59	0.26	AA00
213	7jrs_B_A85_C86	AAA	AA00	77	0.12	AA00
214	7jrs_B_C86_U87	AAA	AA00	87	0.11	AA00
215	7jrs_B_U87_G88	AAA	AA00	88	0.08	AA00
216	7jrs_B_G88_U89	AAA	AA00	87	0.17	AA00
217	7jrs_B_U89_C90	AAA	AA00	50	0.32	AA00
218	7jrs_B_C90_A91	AAA	AA00	91	0.11	AA00
219	7jrs_B_A91_G92	AAA	AA04	59	0.27	AA04
220	7jrs_B_G92_G93	NAN	NANT	0	0.70	AB02
221	7jrs_B_G93_U94	NAN	NANT	0	1.62	BA16
222	7jrs_B_U94_C95	AAA	AA08	15	0.43	AA08
223	7jrs_B_C95_G96	AAA	AA08	92	0.16	AA08
224	7jrs_B_G96_C97	AAA	AA00	83	0.20	AA00
225	7jrs_B_C97_U98	AAA	AA00	82	0.21	AA00
226	7jrs_B_U98_G99	AAA	AA00	90	0.12	AA00
227	7jrs_B_G99_A100	AAA	AA00	89	0.10	AA00
228	7jrs_B_A100_G101	AAA	AA00	93	0.08	AA00
229	7jrs_B_G101_U102	AAA	AA00	87	0.14	AA00
230	7jrs_B_U102_C103	AAA	AA00	89	0.15	AA00
231	7jrs_B_C103_G104	AAA	AA00	74	0.25	AA00
232	7jrs_B_G104_G105	NAN	NANT	0	1.58	OP06
233	7jrs_B_G105_C106	AAw	AA01	69	0.25	AA01
234	7jrs_B_C106_G107	AAA	AA00	85	0.15	AA00
235	7jrs_B_G107_U108	AAA	AA00	94	0.14	AA00
236	7jrs_B_U108_C109	AAA	AA00	94	0.11	AA00
237	7jrs_B_C109_C110	AAA	AA00	88	0.15	AA00
238	7jrs_B_C110_C111	AAA	AA00	89	0.13	AA00
239	7jrs_B_C111_A112	AAA	AA00	78	0.10	AA00
240	7jrs_B_A112_G113	AAA	AA00	73	0.14	AA00
241	7jrs_B_G113_U114	AAA	AA00	87	0.13	AA00
242	7jrs_B_U114_U115	AAA	AA00	86	0.18	AA00
243	7jrs_B_U115_G116	AAA	AA00	37	0.29	AA00
244	7jrs_B_G116_A117	AAA	AA00	80	0.11	AA00
245	7jrs_B_A117_U118	AAA	AA00	86	0.12	AA00
246	7jrs_B_U118_G119	AAA	AA00	83	0.10	AA00
247	7jrs_B_G119_G120	AAA	AA00	72	0.19	AA00
248	7jrs_B_G120_G121	AAA	AA00	31	0.40	AA00
249	7jrs_B_G121_G122	A-B	AB05	65	0.28	AB05
250	7jrs_B_G122_A123	NAN	NANT	0	0.86	OP22
251	7jrs_B_A123_G124	NAN	NANT	0	1.10	BB14
252	7jrs_B_G124_C125	AAA	AA00	93	0.12	AA00
253	7jrs_B_C125_U126	AAA	AA00	84	0.18	AA00
254	7jrs_B_U126_A127	AAA	AA00	94	0.11	AA00
255	7jrs_B_A127_C128	AAA	AA00	78	0.20	AA00
256	7jrs_B_C128_C129	NAN	NANT	0	0.90	ZZ01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 256 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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