DNATCO v4.1: results

Crystal structure of xanthine riboswitch with 8-azaxanthine

Results of the assignment of 88 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	7els_A_G2_A3	AAA	AA00	85	0.10	AA00
02	7els_A_A3_G4	AAA	AA00	84	0.18	AA00
03	7els_A_G4_U5	AAA	AA00	67	0.35	AA00
04	7els_A_U5_A6	A-B	AB05	66	0.29	AB05
05	7els_A_A6_G7	OPN	OP15	66	0.52	OP15
06	7els_A_G7_A8	AAw	AA05	32	0.57	AA05
07	7els_A_A8_A9	NAN	NANT	0	0.88	AA11
08	7els_A_A9_G10	AAA	AA00	43	0.43	AA00
09	7els_A_G10_C11	AAw	AA01	81	0.14	AA01
10	7els_A_C11_G12	AAw	AA11	57	0.42	AA11
11	7els_A_G12_U13	AAu	AA12	51	0.64	AA12
12	7els_A_U13_U14	AAA	AA00	93	0.11	AA00
13	7els_A_U14_C15	AAA	AA00	78	0.20	AA00
14	7els_A_C15_A16	AAw	AA01	36	0.26	AA01
15	7els_A_A16_G17	AAA	AA08	72	0.38	AA08
16	7els_A_G17_C18	AAA	AA00	78	0.11	AA00
17	7els_A_C18_G19	AAw	AA06	89	0.20	AA06
18	7els_A_G19_G20	AAA	AA08	38	0.34	AA08
19	7els_A_G20_C21	AAA	AA08	87	0.18	AA08
20	7els_A_C21_C22	AAA	AA08	85	0.16	AA08
21	7els_A_C22_G23	AAA	AA00	88	0.20	AA00
22	7els_A_G23_A24	NAN	NANT	0	0.42	OP04
23	7els_A_A24_A25	AAA	AA00	25	0.42	AA00
24	7els_A_A25_A26	AAA	AA04	78	0.26	AA04
25	7els_A_A26_G27	NAN	NANT	0	0.94	AA08
26	7els_A_G27_G28	AAA	AA00	77	0.17	AA00
27	7els_A_G28_C29	AAA	AA08	88	0.14	AA08
28	7els_A_C29_C30	AAA	AA00	84	0.18	AA00
29	7els_A_C30_G31	AAA	AA00	82	0.14	AA00
30	7els_A_G31_C32	AAw	AA01	35	0.31	AA01
31	7els_A_C32_C33	AAA	AA08	76	0.36	AA08
32	7els_A_C33_C34	NAN	NANT	0	1.27	IC04
33	7els_A_C34_G35	NAN	NANT	0	1.42	OP30
34	7els_A_G35_G36	NAN	NANT	0	1.86	OP29
35	7els_A_G36_A37	AAA	AA08	71	0.18	AA08
36	7els_A_A37_A38	AAA	AA00	87	0.14	AA00
37	7els_A_A38_A39	AAA	AA08	87	0.25	AA08
38	7els_A_A39_U40	AAA	AA08	84	0.16	AA08
39	7els_A_U40_U41	AAA	AA08	71	0.24	AA08
40	7els_A_U41_G42	AAw	AA06	39	0.23	AA06
41	7els_A_G42_C43	AAA	AA08	85	0.19	AA08
42	7els_A_C43_U44	AAA	AA00	74	0.16	AA00
43	7els_A_U44_C45	AAA	AA00	73	0.20	AA00
44	7els_A_C45_C46	AAA	AA00	90	0.14	AA00
45	7els_B_G2_A3	AAA	AA00	67	0.26	AA00
46	7els_B_A3_G4	AAA	AA00	76	0.21	AA00
47	7els_B_G4_U5	AAA	AA00	82	0.27	AA00
48	7els_B_U5_A6	A-B	AB05	72	0.29	AB05
49	7els_B_A6_G7	NAN	NANT	0	0.56	OP15
50	7els_B_G7_A8	AAw	AA05	30	0.64	AA05
51	7els_B_A8_A9	AAA	AA03	12	0.58	AA03
52	7els_B_A9_G10	AAA	AA00	79	0.22	AA00
53	7els_B_G10_C11	AAA	AA08	86	0.23	AA08
54	7els_B_C11_G12	NAN	NANT	0	0.61	AA10
55	7els_B_G12_U13	AAu	AA07	38	0.43	AA07
56	7els_B_U13_U14	AAA	AA00	33	0.29	AA00
57	7els_B_U14_C15	AAA	AA08	91	0.18	AA08
58	7els_B_C15_A16	AAw	AA06	79	0.32	AA06
59	7els_B_A16_G17	AAA	AA03	25	0.53	AA03
60	7els_B_G17_C18	AAw	AA01	74	0.23	AA01
61	7els_B_C18_G19	AAw	AA06	64	0.33	AA06
62	7els_B_G19_G20	AAA	AA08	58	0.28	AA08
63	7els_B_G20_C21	AAA	AA08	67	0.29	AA08
64	7els_B_C21_C22	AAw	AA06	72	0.38	AA06
65	7els_B_C22_G23	AAA	AA08	48	0.38	AA08
66	7els_B_G23_A24	OPN	OP03	41	0.24	OP03
67	7els_B_A24_A25	AAA	AA08	69	0.33	AA08
68	7els_B_A25_A26	AAA	AA04	80	0.24	AA04
69	7els_B_A26_G27	NAN	NANT	0	0.90	AA08
70	7els_B_G27_G28	AAA	AA08	68	0.41	AA08
71	7els_B_G28_C29	AAA	AA08	86	0.17	AA08
72	7els_B_C29_C30	AAA	AA00	81	0.24	AA00
73	7els_B_C30_G31	AAA	AA00	77	0.12	AA00
74	7els_B_G31_C32	AAA	AA04	79	0.23	AA04
75	7els_B_C32_C33	AAA	AA08	80	0.28	AA08
76	7els_B_C33_C34	NAN	NANT	0	0.82	AA10
77	7els_B_C34_G35	NAN	NANT	0	1.05	IC03
78	7els_B_G35_G36	NAN	NANT	0	1.61	OP26
79	7els_B_G36_A37	NAN	NANT	0	0.33	AA06
80	7els_B_A37_A38	AAA	AA08	91	0.18	AA08
81	7els_B_A38_A39	AAA	AA00	89	0.17	AA00
82	7els_B_A39_U40	AAA	AA08	84	0.18	AA08
83	7els_B_U40_U41	AAA	AA08	79	0.22	AA08
84	7els_B_U41_G42	AAw	AA06	72	0.21	AA06
85	7els_B_G42_C43	AAA	AA08	76	0.27	AA08
86	7els_B_C43_U44	AAA	AA08	79	0.17	AA08
87	7els_B_U44_C45	AAA	AA00	65	0.15	AA00
88	7els_B_C45_C46	NAN	NANT	0	0.44	AA10

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 88 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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