DNATCO v4.1: results

Crystal structure of xanthine riboswitch with xanthine, manganese saok

Results of the assignment of 88 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	7elq_A_G2_A3	AAA	AA04	86	0.15	AA04
02	7elq_A_A3_G4	AAA	AA00	89	0.17	AA00
03	7elq_A_G4_U5	AAA	AA04	70	0.41	AA04
04	7elq_A_U5_A6	NAN	NANT	0	0.58	AB04
05	7elq_A_A6_G7	NAN	NANT	0	0.49	OP15
06	7elq_A_G7_A8	AAA	AA00	82	0.23	AA00
07	7elq_A_A8_A9	AAw	AA01	34	0.43	AA01
08	7elq_A_A9_G10	AAA	AA00	39	0.45	AA00
09	7elq_A_G10_C11	AAA	AA00	80	0.14	AA00
10	7elq_A_C11_G12	A-B	AB05	87	0.16	AB05
11	7elq_A_G12_U13	OPN	OP15	77	0.25	OP15
12	7elq_A_U13_U14	AAA	AA04	90	0.19	AA04
13	7elq_A_U14_C15	AAA	AA03	91	0.19	AA03
14	7elq_A_C15_A16	AAw	AA01	11	0.28	AA01
15	7elq_A_A16_G17	AAA	AA08	42	0.52	AA08
16	7elq_A_G17_C18	AAw	AA06	52	0.37	AA06
17	7elq_A_C18_G19	NAN	NANT	0	1.34	OP24
18	7elq_A_G19_G20	AAA	AA08	69	0.27	AA08
19	7elq_A_G20_C21	AAA	AA08	65	0.29	AA08
20	7elq_A_C21_C22	AAA	AA00	72	0.23	AA00
21	7elq_A_C22_G23	AAA	AA00	85	0.23	AA00
22	7elq_A_G23_A24	OPN	OP04	73	0.28	OP04
23	7elq_A_A24_A25	AAA	AA04	76	0.31	AA04
24	7elq_A_A25_A26	AAA	AA00	60	0.29	AA00
25	7elq_A_A26_G27	NAN	NANT	0	0.98	AA08
26	7elq_A_G27_G28	AAA	AA04	81	0.28	AA04
27	7elq_A_G28_C29	AAA	AA08	74	0.19	AA08
28	7elq_A_C29_C30	AAA	AA00	89	0.17	AA00
29	7elq_A_C30_G31	AAA	AA00	68	0.19	AA00
30	7elq_A_G31_C32	AAA	AA00	80	0.21	AA00
31	7elq_A_C32_C33	AAA	AA00	20	0.49	AA00
32	7elq_A_C33_C34	NAN	NANT	0	1.20	AA10
33	7elq_A_C34_G35	NAN	NANT	0	1.20	IC01
34	7elq_A_G35_G36	NAN	NANT	0	1.40	OP30
35	7elq_A_G36_A37	AAA	AA00	56	0.25	AA00
36	7elq_A_A37_A38	AAA	AA04	82	0.20	AA04
37	7elq_A_A38_A39	AAA	AA08	60	0.34	AA08
38	7elq_A_A39_U40	AAA	AA00	77	0.16	AA00
39	7elq_A_U40_U41	AAA	AA00	79	0.26	AA00
40	7elq_A_U41_G42	AAw	AA06	14	0.22	AA06
41	7elq_A_G42_C43	AAA	AA08	42	0.26	AA08
42	7elq_A_C43_U44	AAA	AA00	43	0.30	AA00
43	7elq_A_U44_C45	AAA	AA00	79	0.14	AA00
44	7elq_A_C45_C46	AAA	AA04	89	0.20	AA04
45	7elq_B_G2_A3	AAA	AA04	86	0.19	AA04
46	7elq_B_A3_G4	AAA	AA00	78	0.19	AA00
47	7elq_B_G4_U5	AAA	AA04	82	0.25	AA04
48	7elq_B_U5_A6	NAN	NANT	0	0.57	AB04
49	7elq_B_A6_G7	NAN	NANT	0	0.39	OP15
50	7elq_B_G7_A8	AAA	AA00	68	0.29	AA00
51	7elq_B_A8_A9	AAw	AA01	28	0.47	AA01
52	7elq_B_A9_G10	AAA	AA00	48	0.41	AA00
53	7elq_B_G10_C11	AAA	AA00	70	0.23	AA00
54	7elq_B_C11_G12	A-B	AB05	87	0.14	AB05
55	7elq_B_G12_U13	OPN	OP15	58	0.41	OP15
56	7elq_B_U13_U14	AAA	AA04	89	0.22	AA04
57	7elq_B_U14_C15	AAA	AA03	89	0.26	AA03
58	7elq_B_C15_A16	AAw	AA01	10	0.33	AA01
59	7elq_B_A16_G17	AAA	AA08	37	0.54	AA08
60	7elq_B_G17_C18	AAw	AA06	73	0.15	AA06
61	7elq_B_C18_G19	AAw	AA11	44	0.47	AA11
62	7elq_B_G19_G20	AAA	AA08	66	0.26	AA08
63	7elq_B_G20_C21	AAw	AA11	59	0.33	AA11
64	7elq_B_C21_C22	AAA	AA08	27	0.33	AA08
65	7elq_B_C22_G23	AAA	AA00	74	0.33	AA00
66	7elq_B_G23_A24	OPN	OP04	69	0.29	OP04
67	7elq_B_A24_A25	AAA	AA08	36	0.34	AA08
68	7elq_B_A25_A26	AAA	AA00	76	0.22	AA00
69	7elq_B_A26_G27	AAA	AA08	46	0.64	AA08
70	7elq_B_G27_G28	AAw	AA01	31	0.33	AA01
71	7elq_B_G28_C29	NAN	NANT	0	0.48	AA11
72	7elq_B_C29_C30	AAA	AA00	75	0.30	AA00
73	7elq_B_C30_G31	AAA	AA00	71	0.16	AA00
74	7elq_B_G31_C32	AAA	AA00	82	0.18	AA00
75	7elq_B_C32_C33	AAA	AA00	68	0.33	AA00
76	7elq_B_C33_C34	NAN	NANT	0	0.78	AA10
77	7elq_B_C34_G35	NAN	NANT	0	1.12	IC03
78	7elq_B_G35_G36	NAN	NANT	0	1.93	OP29
79	7elq_B_G36_A37	AAA	AA00	47	0.25	AA00
80	7elq_B_A37_A38	AAA	AA04	85	0.15	AA04
81	7elq_B_A38_A39	AAA	AA08	59	0.34	AA08
82	7elq_B_A39_U40	AAA	AA00	75	0.19	AA00
83	7elq_B_U40_U41	AAA	AA00	81	0.23	AA00
84	7elq_B_U41_G42	AAw	AA06	14	0.26	AA06
85	7elq_B_G42_C43	AAA	AA08	45	0.33	AA08
86	7elq_B_C43_U44	AAA	AA00	75	0.17	AA00
87	7elq_B_U44_C45	AAA	AA00	75	0.14	AA00
88	7elq_B_C45_C46	AAA	AA04	78	0.31	AA04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 88 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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