DNATCO v4.1: results

Bulged-G motif composed of RNA, DNA and 2'-O-methyl RNA

Results of the assignment of 45 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	7eeo_A_OMC3_OMU4	NAN	NANT	0	0.85	AB02
02	7eeo_A_OMU4_OMC5	AAA	AA00	79	0.27	AA00
03	7eeo_A_OMC5_OMC6	AAA	AA08	83	0.17	AA08
04	7eeo_A_OMC6_OMU7	AAA	AA00	68	0.34	AA00
05	7eeo_A_OMU7_DA8	ZZZ	ZZ01	83	0.17	ZZ01
06	7eeo_A_DA8_DG9	NAN	NANT	0	0.74	OP24
07	7eeo_A_DG9_OMU10	NAN	NANT	0	0.18	OP15
08	7eeo_A_OMU10_A2M11	AAA	AA00	40	0.37	AA00
09	7eeo_A_A2M11_OMC12	AAA	AA00	32	0.40	AA00
10	7eeo_A_OMC12_G13	AAA	AA00	72	0.22	AA00
11	7eeo_A_G13_A14	OPN	OP03	24	0.44	OP03
12	7eeo_A_A14_G15	AAA	AA08	50	0.43	AA08
13	7eeo_A_G15_A16	AAA	AA09	83	0.20	AA09
14	7eeo_A_A16_G17	AAw	AA05	20	0.48	AA05
15	7eeo_A_G17_G18	AAA	AA08	65	0.44	AA08
16	7eeo_A_G18_A19	OPN	OP08	47	0.23	OP08
17	7eeo_A_A19_C20	AAA	AA08	71	0.32	AA08
18	7eeo_A_C20_C21	AAA	AA08	81	0.35	AA08
19	7eeo_A_C21_G22	AAA	AA00	25	0.47	AA00
20	7eeo_A_G22_G23	AAA	AA08	75	0.20	AA08
21	7eeo_A_G23_A24	AAA	AA08	92	0.14	AA08
22	7eeo_A_A24_G25	AAA	AA00	90	0.16	AA00
23	7eeo_A_G25_U26	AAA	AA00	70	0.21	AA00
24	7eeo_B_OMU4_OMC5	AAA	AA04	63	0.31	AA04
25	7eeo_B_OMC5_OMC6	AAA	AA08	72	0.29	AA08
26	7eeo_B_OMC6_OMU7	AAA	AA00	76	0.27	AA00
27	7eeo_B_OMU7_DA8	ZZZ	ZZ01	95	0.11	ZZ01
28	7eeo_B_DA8_DG9	OPN	OP23	70	0.16	OP23
29	7eeo_B_DG9_OMU10	OPN	OP15	62	0.18	OP15
30	7eeo_B_OMU10_A2M11	AAA	AA08	80	0.23	AA08
31	7eeo_B_A2M11_OMC12	AAA	AA08	63	0.45	AA08
32	7eeo_B_OMC12_G13	AAA	AA00	86	0.25	AA00
33	7eeo_B_G13_A14	OPN	OP03	74	0.19	OP03
34	7eeo_B_A14_G15	AAA	AA08	29	0.39	AA08
35	7eeo_B_G15_A16	AAA	AA08	87	0.29	AA08
36	7eeo_B_A16_G17	AAw	AA05	76	0.30	AA05
37	7eeo_B_G17_G18	AAA	AA08	67	0.46	AA08
38	7eeo_B_G18_A19	OPN	OP08	33	0.20	OP08
39	7eeo_B_A19_C20	AAA	AA08	63	0.32	AA08
40	7eeo_B_C20_C21	AAA	AA00	15	0.44	AA00
41	7eeo_B_C21_G22	AAA	AA00	29	0.49	AA00
42	7eeo_B_G22_G23	AAA	AA08	89	0.20	AA08
43	7eeo_B_G23_A24	AAA	AA00	76	0.25	AA00
44	7eeo_B_A24_G25	AAA	AA04	83	0.21	AA04
45	7eeo_B_G25_U26	AAA	AA08	67	0.24	AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 45 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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